Detailed Information for Phage Serendipitous |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Lindsey Farris |
Year Found | 2015 |
Location Found | High Shoals, NC USA |
Finding Institution | Western Carolina University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 35.4026 N, 81.2023 W Map |
Discovery Notes | This phage was found in a sample that was collected from a home-built compost pile. The soil was from the bottom of the compost pile, about two feet in the compost box. |
Naming Notes | The name for this phage was chosen because the word 'serendipitous' means by luck or chance, which is what the entire process of finding and isolating phage has been. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 9, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 999 |
Genome length (bp) | 69867 |
Character of genome ends | Circularly Permuted |
GC Content | 68.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B5 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Western Carolina University |
Annotation Status | In GenBank |
Plaque Notes | The plaques that this phages makes are extremely small and can be difficult to see. |
Morphotype | Siphoviridae |
Number of Genes | 98 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH727561 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
2.816 x 10^9 |
Date of SEA Lysate Titering |
Nov 10, 2015 |
Pitt Freezer Box# |
19 |
Pitt Freezer Box Grid# |
G11 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |