| Detailed Information for Phage Shenandoah |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Katherine Cooper |
| Year Found | 2024 |
| Location Found | Harrisonburg, VA United States of America |
| Finding Institution | James Madison University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | 37°C |
| GPS Coordinates | 38.429278 N, 78.86125 W Map |
| Discovery Notes | It was in benthic soil in the arboretum drainage area. The soil was dug into roughly 6-8 centimeters past the foliage cover. |
| Naming Notes | The valley where it was found. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 27, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 1677 |
| Genome length (bp) | 68590 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B3 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | James Madison University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Plaque Notes | Temporal phage which has small, pin-like plaques. |
| Morphotype | Siphoviridae |
| Number of Genes | 103 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |