Detailed Information for Phage SlippinJimmy |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Nicholas Sahadak |
Year Found | 2023 |
Location Found | harrisonburg, VA United States America |
Finding Institution | James Madison University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 16°C |
GPS Coordinates | 38.434 N, 78.86 W Map |
Discovery Notes | Found in a garden outside of JMU's Bioscience building. |
Naming Notes | Big Better Call Saul Fans. This phage was worked on with Thomas Jones and Meghan Pendleton. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 7, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 9312 |
Genome length (bp) | 70038 |
Character of genome ends | Circularly Permuted |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B3 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | James Madison University |
Annotation Status | Overdue (Expected completion by 5/1/2024) |
Plaque Notes | small clear plaques. |
Morphotype | Siphoviridae |
Number of Genes | 106 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
170 |
Pitt Freezer Box Grid# |
F8 |