Detailed Information for Phage Struggle |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Riley Taylor |
Year Found | 2014 |
Location Found | Lincoln , NE USA |
Finding Institution | Nebraska Wesleyan University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.84013 N, 96.650055 W Map |
Discovery Notes | Soil sample was collected in Lincoln Nebraska at Nebraska Wesleyan University. The temperature at the time was 69ºF, and collected on 09/15/2014. |
Naming Notes | Named the phage struggle because of the many trials and errors I had with contamination in discovering the virus. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 19, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2179 |
Genome length (bp) | 68669 |
Character of genome ends | Circularly Permuted |
GC Content | 66.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 102 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK279883 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
8 |
Pitt Freezer Box Grid# |
D6 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |