| Detailed Information for Phage SwainyDoc |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Brenna Adams |
| Year Found | 2024 |
| Location Found | Conway, SC USA |
| Finding Institution | Coastal Carolina University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 33.79697 N, 79.01052 W Map |
| Discovery Notes | The sample was collected from underneath the mulch of a flowerbed right outside of Swain Hall on Coastal Carolina University campus. The sample was dark and moist. |
| Naming Notes | The phage was named after Swain Hall, which was the location where it was founded and after the founders' dog, who's name is Doc. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 9, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 4475 |
| Genome length (bp) | 68881 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B3 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Coastal Carolina University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Plaque Notes | The plaques are small and very uniform to each other. There is no mesas so all of the plaques have complete clearings. |
| Morphotype | Siphoviridae |
| Number of Genes | 102 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |