| Detailed Information for Phage Vaticameos |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Selam Haile |
| Year Found | 2017 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | Drexel University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.953333 N, 75.19 W Map |
| Discovery Notes | 10/4/17
11:28 am
71°F
33rd Street, in between Chestnut St. and Walnut St., 19104
The soil was found around some trees. I dug down about 2 inches and the soil was pretty dry with some mulch and other bits and particles in it - the soil was not very smooth.
|
| Naming Notes | The name refers to a condensed version of the code word for danger on the BBC show, Sherlock. (Vatican Cameos) |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 31, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1326 |
| Genome length (bp) | 66887 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Drexel University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are small and round; a little less than 2 mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 99 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH590588 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
61 |
| Pitt Freezer Box Grid# |
E2 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
