Detailed Information for Phage Weher20 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | S. Sobczyk, L. Cartagena, A. Papiez, J. Hamer |
Year Found | 2020 |
Location Found | Kenosha, WI United States |
Finding Institution | Carthage College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 42.620259 N, 87.820516 W Map |
Discovery Notes | Discovered in soil about 5.50 cm deep. It was about 22 degrees Celsius outside. SE of the Todd Weher building under three bushes. It was a thicker dry soil with wood chips, and you were able to see bush roots and decaying bush leaves on the soil. It was about a foot away from the first bush. |
Naming Notes | Named after the building it found closest to paired with the year it was found. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 25, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 111 |
Genome length (bp) | 68684 |
Character of genome ends | Circularly Permuted |
GC Content | 66.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of the Ozarks |
Annotation Status | In GenBank |
Plaque Notes | The phage plaque is about 1 mm in diameter with halos, which could indicate a temperate phage. |
Morphotype | Siphoviridae |
Number of Genes | 98 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ681520 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
118 |
Pitt Freezer Box Grid# |
H1 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |