Detailed Information for Phage PhenghisKhan |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Wiktoria Gocal |
Year Found | 2015 |
Location Found | Philadelphia, PA USA |
Finding Institution | Drexel University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 39.958806 N, 75.189612 W Map |
Discovery Notes | Discovered on the south most corner of the grass patch at the corner of Race and 33rd Street. Sample obtained on 09/22/2015 at 6:37 PM with outside temperature at 21°C, at a depth of about 10cm. |
Naming Notes | This phage is similar to its ruthless historical predecessor, Genghis Khan, in that it behaves very aggressively. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 13, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1177 |
Genome length (bp) | 68727 |
Character of genome ends | Circularly Permuted |
GC Content | 66.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Phage plaques appeared to be about .35 cm in diameter, all round and clear circles. |
Morphotype | Siphoviridae |
Number of Genes | 102 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG757164 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
25 |
Pitt Freezer Box Grid# |
F11 |
Available Files |
Plaque Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |