Mycobacterium phage Sigman
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Detailed Information for Phage Sigman
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKaitlin Price
Year Found2011
Location Found USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.442802 N, 79.962841 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 13, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent
Approximate Shotgun Coverage645
Genome length (bp)68311
Character of genome endsCircularly Permuted
GC Content66.5%
Sequencing NotesAssembled from PGM runs 81 and RaSiBl
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque Notesmigrating plaque
MorphotypeSiphoviridae
Number of Genes101
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKP027209
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# G1
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload