Detailed Information for Phage Usavi |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Julie Ladd |
Year Found | 2011 |
Location Found | Helena, MT USA |
Finding Institution | Helena High School |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 46 N, 112 W Map |
Discovery Notes | Purified at Helena High and 10x-2 lysate brought to Pitt. for the Teachers Workshop 2012. Nothing done beyond that. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 4, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1029 |
Genome length (bp) | 69178 |
Character of genome ends | Circularly Permuted |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of California, Los Angeles |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 102 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR475246 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
119 |
Pitt Freezer Box Grid# |
A3 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |