Mycobacterium phage Elph10
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Detailed Information for Phage Elph10
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesElphonso10
Found ByAdam Groth
Year Found2010
Location FoundRiver Falls, WI USA
Finding InstitutionUniversity of Wisconsin-River Falls
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates44.851678 N, 92.623619 W Map
Discovery NotesDepth: 4cm
Air temp: 60°F
Soil Type: slightly sandy
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2011
Genome length (bp)74675
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesSize: 1mm in diameter
Clear
Halos formed after 48 hours of incubation
MorphotypeSiphoviridae
Number of Genes143
Number of tRNAs2
Has been Phamerated?Yes
Gene List

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Elph10_1

Elph10_2

Elph10_3

Elph10_4

Elph10_5

Elph10_6
(terminase small subunit)

Elph10_7

Elph10_8

Elph10_9
(terminase large subunit)

Elph10_10

Elph10_11
(portal protein)

Elph10_12
(capsid maturation protease)

Elph10_13
(major capsid protein)

Elph10_14

Elph10_15

Elph10_16

Elph10_17

Elph10_18

Elph10_19
(major tail subunit)

Elph10_20

Elph10_21
(tail assembly chaperone)

Elph10_22
(tail assembly chaperone)

Elph10_23
(tapemeasure protein)

Elph10_24
(minor tail subunit)

Elph10_25
(minor tail subunit)

Elph10_26
(minor tail subunit)

Elph10_27
(minor tail subunit)

Elph10_28
(D-Ala-D-Ala carboxypeptidase)

Elph10_29

Elph10_30

Elph10_31

Elph10_32

Elph10_33
(lysin A)

Elph10_34
(holin)

Elph10_35

Elph10_36
(lysin B)

Elph10_37

Elph10_38
(NrdH)

Elph10_39
(Lsr2)

Elph10_40

Elph10_41

Elph10_42

Elph10_43

Elph10_44

Elph10_45

Elph10_46

Elph10_47

Elph10_48

Elph10_49

Elph10_50

Elph10_51

Elph10_52
(integrase)

Elph10_53

Elph10_54

Elph10_55

Elph10_56

Elph10_57

Elph10_58
(pentapeptide repeat family protein)

Elph10_59

Elph10_60

Elph10_61

Elph10_62

Elph10_63

Elph10_64

Elph10_65

Elph10_66

Elph10_67

Elph10_68

Elph10_69
(Erf)

Elph10_70

Elph10_71

Elph10_72

Elph10_73

Elph10_74

Elph10_75

Elph10_76

Elph10_77
(HNH endonuclease domain protein)

Elph10_78

Elph10_79

Elph10_80

Elph10_81
(DnaB-like helicase)

Elph10_82

Elph10_83

Elph10_84

Elph10_85

Elph10_86

Elph10_87

Elph10_88
(Pnk)

Elph10_89

Elph10_90

Elph10_91

Elph10_92
(RNA ligase)

Elph10_93

Elph10_94
(WhiB)

Elph10_95

Elph10_96

Elph10_97

Elph10_98

Elph10_99
(DNA methyltransferase)

Elph10_100
(ssDNA binding protein)

Elph10_101
(Clp protease)

Elph10_102

Elph10_103

Elph10_104

Elph10_105

Elph10_108

Elph10_109

Elph10_110

Elph10_111

Elph10_112
(DnaQ-like exonuclease)

Elph10_113

Elph10_114
(RecA)

Elph10_115

Elph10_116

Elph10_117

Elph10_118

Elph10_119

Elph10_120

Elph10_121

Elph10_122

Elph10_123

Elph10_124

Elph10_125

Elph10_126
(ParBc domain protein)

Elph10_127

Elph10_128

Elph10_129

Elph10_130

Elph10_131

Elph10_132

Elph10_133

Elph10_134

Elph10_135

Elph10_136

Elph10_137

Elph10_138

Elph10_139

Elph10_140

Elph10_141

Elph10_142

Elph10_143

Elph10_144

Elph10_145

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN391441
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator 2010UWRFElph10AMG
SEA Lysate Titer 4.2e10
Date of SEA Lysate Titering Oct 20, 2010
Pitt Freezer Box# 1
Pitt Freezer Box Grid# G3
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload