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Mycobacterium phage Rimmer
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Detailed Information for Phage Rimmer
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAubriel Kepler & Christian Nakabayashi
Year Found2014
Location FoundOlympia, WA USA
Finding InstitutionThe Evergreen State College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates47.023056 N, 122.852778 W Map
Discovery NotesThis Phage was adopted on 10/31/2014.
Naming NotesRimmer, like many phages, is believed to have a large head. Seeing as you are what you eat, and this phage "feeds" on M.Smeg, it must be a "Smeg Head". Therefore this Phage has been named for the character Arnold Rimmer, a.k.a "Smeg Head", from the British Space Spoof Red Dwarf.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 16, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2261
Genome length (bp)75660
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Other Cluster Members
Plaque NotesThis phage results in plaques on a bacterial lawn of three distinct sizes: Small, Medium, and Large. Small is less than .5mm in diameter, medium is close to 1mm in diameter, and the large plaques are close to 2mm in diameter.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
EM PictureDownload