Mycobacterium phage Hopey
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Hopey
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAllison, Anthony + Miranda
Year Found2013
Location FoundNorth Andover, MA USA
Finding InstitutionMerrimack College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.669331 N, 71.124094 W Map
Discovery NotesFrom a truck tire track on the Merrimack College campus.
Naming NotesOur president, Christopher Hopey.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 10, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3442
Genome length (bp)75586
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusBeing Annotated (Expected completion by 5/15/2018)
Plaque NotesCloudy with rings around the outer edge
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 14
Pitt Freezer Box Grid# G9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload