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Mycobacterium phage Phrux
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Detailed Information for Phage Phrux
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByPatrick Campbell
Year Found2011
Location FoundOxford, OH USA
Finding InstitutionMiami University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates39.516305 N, 84.736070 W Map
Discovery NotesFound in soil under mulch beneath a tree.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 29, 2012
Approximate Shotgun Coverage340
Genome length (bp)74711
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Other Cluster Members
Plaque NotesSmall, cloudy, lysogenic phages, all similar in size.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

Phrux_1

Phrux_2

Phrux_3

Phrux_4

Phrux_5
(terminase, small subunit)

Phrux_6

Phrux_7

Phrux_8
(terminase, large subunit)

Phrux_9

Phrux_10
(portal)

Phrux_11
(capsid maturation protease)

Phrux_12
(major capsid protein)

Phrux_13

Phrux_14

Phrux_15

Phrux_16

Phrux_17

Phrux_18
(major tail subunit)

Phrux_19

Phrux_20
(tail assembly chaperone)

Phrux_21
(tail assembly chaperone)

Phrux_22
(tapemeasure)

Phrux_23
(minor tail protein)

Phrux_24
(minor tail protein)

Phrux_25
(minor tail protein)

Phrux_26
(minor tail protein)

Phrux_27
(D-ala-D-ala carboxypeptidase)

Phrux_28

Phrux_29

Phrux_30

Phrux_31

Phrux_32
(lysin A)

Phrux_33
(holin)

Phrux_34

Phrux_35
(lysin B)

Phrux_36

Phrux_37
(NrdH-like)

Phrux_38

Phrux_39
(Lsr2)

Phrux_40

Phrux_41

Phrux_42

Phrux_43

Phrux_44

Phrux_45

Phrux_46

Phrux_47

Phrux_48

Phrux_49

Phrux_50
(integrase (Y-int))

Phrux_51

Phrux_52

Phrux_53
(immunity repressor)

Phrux_54

Phrux_55

Phrux_56
(pentapeptide repeat family)

Phrux_57

Phrux_58

Phrux_59

Phrux_60

Phrux_61

Phrux_62

Phrux_63

Phrux_64

Phrux_65

Phrux_66
(Erf)

Phrux_67

Phrux_68

Phrux_69

Phrux_70

Phrux_71

Phrux_72

Phrux_73

Phrux_74
(HNH endonuclease domain)

Phrux_75

Phrux_76

Phrux_77

Phrux_78
(DnaB-like Helicase)

Phrux_79

Phrux_80

Phrux_81

Phrux_82

Phrux_83

Phrux_84

Phrux_85
(Pnk)

Phrux_86

Phrux_87

Phrux_88

Phrux_89
(RNA ligase)

Phrux_90

Phrux_91
(WhiB)

Phrux_92

Phrux_93

Phrux_94

Phrux_95

Phrux_96
(DNA methylase)

Phrux_97
(ssDNA binding protein)

Phrux_98
(Clp protease)

Phrux_99

Phrux_100

Phrux_101

Phrux_102

Phrux_105

Phrux_106

Phrux_107

Phrux_108

Phrux_109
(DnaQ-like exonuclease)

Phrux_110

Phrux_111
(RecA)

Phrux_112

Phrux_113

Phrux_114

Phrux_115

Phrux_116

Phrux_117

Phrux_118

Phrux_119

Phrux_120

Phrux_121

Phrux_122

Phrux_123

Phrux_124

Phrux_125

Phrux_126

Phrux_127

Phrux_128

Phrux_129

Phrux_130

Phrux_131

Phrux_132

Phrux_133

Phrux_134

Phrux_135

Phrux_136

Phrux_137

Phrux_138

Phrux_139

Phrux_140

Phrux_141

Phrux_142

Phrux_143
(HNH endonuclease domain)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKC661277
Refseq NumberNC_021309
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload