Mycobacterium phage ShereKhan

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Detailed Information for Phage ShereKhan
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEnya Childs
Year Found2016
Location FoundOrono, ME United States
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesFound in a flower box, probably came from potting soil
Naming NotesJungle Book character
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 13, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage991
Genome length (bp)76133
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.1%
Fasta file available?Available upon entering GPS coordinates
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesClear plaques, two different plaque morphologies
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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ShereKhan_1

ShereKhan_2

ShereKhan_3

ShereKhan_4

ShereKhan_5

ShereKhan_6
(terminase small subunit)

ShereKhan_7
(membrane protein)

ShereKhan_8

ShereKhan_9

ShereKhan_10
(terminase large subunit)

ShereKhan_11

ShereKhan_12
(portal protein)

ShereKhan_13
(capsid maturation protease)

ShereKhan_14
(major capsid protein)

ShereKhan_15

ShereKhan_16
(head-to-tail connector complex protein)

ShereKhan_17
(head-to-tail connector complex protein)

ShereKhan_18

ShereKhan_19
(head-to-tail connector complex protein)

ShereKhan_20
(major tail protein)

ShereKhan_21

ShereKhan_22
(tail assembly chaperone)

ShereKhan_23
(tail assembly chaperone)

ShereKhan_24
(tape measure protein)

ShereKhan_25
(minor tail protein)

ShereKhan_26
(minor tail protein)

ShereKhan_27
(minor tail protein)

ShereKhan_28
(minor tail protein)

ShereKhan_29
(D-ala-D-ala carboxypeptidase)

ShereKhan_30
(minor tail protein)

ShereKhan_31

ShereKhan_32
(helix-turn-helix DNA binding domain protein)

ShereKhan_33
(membrane protein)

ShereKhan_34
(lysin A)

ShereKhan_35
(holin)

ShereKhan_36

ShereKhan_37
(lysin B)

ShereKhan_38
(membrane protein)

ShereKhan_39
(NrdH-like glutaredoxin)

ShereKhan_40
(Lsr2-like DNA bridging protein)

ShereKhan_41

ShereKhan_42

ShereKhan_43

ShereKhan_44

ShereKhan_45

ShereKhan_46

ShereKhan_47

ShereKhan_48

ShereKhan_49
(membrane protein)

ShereKhan_50
(integrase)

ShereKhan_51

ShereKhan_52
(membrane protein)

ShereKhan_53
(immunity repressor)

ShereKhan_54

ShereKhan_55
(membrane protein)

ShereKhan_56
(pentapeptide repeat protein)

ShereKhan_57

ShereKhan_58

ShereKhan_59

ShereKhan_60

ShereKhan_61

ShereKhan_62

ShereKhan_63

ShereKhan_64

ShereKhan_65

ShereKhan_66
(exonuclease)

ShereKhan_67

ShereKhan_68
(ERF family ssDNA binding protein)

ShereKhan_69

ShereKhan_70

ShereKhan_71

ShereKhan_72

ShereKhan_73
(membrane protein)

ShereKhan_74

ShereKhan_75
(DprA-like DNA processing chain A)

ShereKhan_76

ShereKhan_77

ShereKhan_78

ShereKhan_79
(DnaB-like dsDNA helicase)

ShereKhan_80

ShereKhan_81
(WhiB family transcription factor)

ShereKhan_82

ShereKhan_83

ShereKhan_84
(holliday junction resolvase)

ShereKhan_85
(membrane protein)

ShereKhan_86
(polynucleotide kinase)

ShereKhan_87

ShereKhan_88
(membrane protein)

ShereKhan_89
(RNA ligase)

ShereKhan_90
(helix-turn-helix DNA binding protein)

ShereKhan_91
(WhiB family transcription factor)

ShereKhan_92

ShereKhan_93

ShereKhan_94

ShereKhan_95

ShereKhan_96

ShereKhan_97
(DNA methylase)

ShereKhan_98
(ssDNA binding protein)

ShereKhan_99
(ClpP-like protease)

ShereKhan_100

ShereKhan_101

ShereKhan_102

ShereKhan_103
(helix-turn-helix DNA binding domain protein)

ShereKhan_104
(HNH endonuclease)

ShereKhan_107

ShereKhan_108

ShereKhan_109
(hydrolase)

ShereKhan_110

ShereKhan_111
(DNA polymerase III subunit)

ShereKhan_112

ShereKhan_113
(RecA-like DNA recombinase)

ShereKhan_114

ShereKhan_115

ShereKhan_116

ShereKhan_117

ShereKhan_118

ShereKhan_119

ShereKhan_120

ShereKhan_121

ShereKhan_122

ShereKhan_123

ShereKhan_124

ShereKhan_125
(helix-turn-helix DNA binding protein)

ShereKhan_126

ShereKhan_127

ShereKhan_128

ShereKhan_129

ShereKhan_130

ShereKhan_131

ShereKhan_132

ShereKhan_133

ShereKhan_134

ShereKhan_135

ShereKhan_136

ShereKhan_137

ShereKhan_138

ShereKhan_139

ShereKhan_140

ShereKhan_141

ShereKhan_142

ShereKhan_143

ShereKhan_144

ShereKhan_145
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH513983
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 44
Pitt Freezer Box Grid# G1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload