Mycobacterium phage DrDrey
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Detailed Information for Phage DrDrey
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEmma Fisher
Year Found2012
Location FoundElmhurst, IL USA
Finding InstitutionYork Community High School
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.879856 N, 87.925411 W Map
Discovery NotesFound in my family's compost bin.
Naming NotesThis phage is named after my awesome sister, Audrey. My best friend Karen calls her Dr. Drey (from auDREY), and Audrey is pretty spiffy so the name fits her and gives us a good laugh. Hopefully this phage will help cure people around the world, and honor these two incredible people!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 7, 2013
Sequencing FacilityUniversity of Pennsylvania DNA Sequencing Facility
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage121
Genome length (bp)77367
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Other Cluster Members
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes144
Number of tRNAs2
Has been Phamerated?Yes
Gene List

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DrDrey_1

DrDrey_2

DrDrey_3

DrDrey_4

DrDrey_5

DrDrey_6

DrDrey_7

DrDrey_8

DrDrey_9
(Terminase, large subunit)

DrDrey_10

DrDrey_11
(Portal)

DrDrey_12
(Capsid Maturation Protease)

DrDrey_13
(Major Capsid)

DrDrey_14

DrDrey_15

DrDrey_16

DrDrey_17

DrDrey_18

DrDrey_19
(Major Tail Subunit)

DrDrey_20

DrDrey_21
(Tail Assembly Chaperone)

DrDrey_22
(Tail Assembly Chaperone)

DrDrey_23
(Tape Measure)

DrDrey_24
(Minor Tail)

DrDrey_25
(Minor Tail)

DrDrey_26
(Minor Tail)

DrDrey_27
(Minor Tail)

DrDrey_28
(D-ala-D-ala carboxypeptidase)

DrDrey_29

DrDrey_30

DrDrey_31

DrDrey_32

DrDrey_33
(Lys A)

DrDrey_34
(Holin)

DrDrey_35

DrDrey_36
(Lys B)

DrDrey_37

DrDrey_38
(NrdH)

DrDrey_39

DrDrey_40

DrDrey_41
(Lsr2)

DrDrey_42

DrDrey_43

DrDrey_44

DrDrey_45

DrDrey_46

DrDrey_47

DrDrey_48

DrDrey_49

DrDrey_50

DrDrey_51

DrDrey_52
(Integrase)

DrDrey_53

DrDrey_54

DrDrey_55
(Immunity Repressor)

DrDrey_56

DrDrey_57
(Pentapeptide repeat)

DrDrey_58

DrDrey_59

DrDrey_60

DrDrey_61

DrDrey_62

DrDrey_63

DrDrey_64

DrDrey_65

DrDrey_66

DrDrey_67

DrDrey_68

DrDrey_69
(ERF)

DrDrey_70

DrDrey_71

DrDrey_72

DrDrey_73

DrDrey_74

DrDrey_75

DrDrey_76

DrDrey_77
(HNH domain)

DrDrey_78

DrDrey_79

DrDrey_80

DrDrey_81
(DnaB-like helicase)

DrDrey_82

DrDrey_83

DrDrey_84

DrDrey_85

DrDrey_86

DrDrey_87

DrDrey_88
(Pnk)

DrDrey_89

DrDrey_90

DrDrey_91
(RNA Ligase)

DrDrey_92

DrDrey_93
(WhiB)

DrDrey_94

DrDrey_95

DrDrey_96

DrDrey_97

DrDrey_98

DrDrey_99
(DNA methylase)

DrDrey_100
(ssDNA binding)

DrDrey_101
(Clp protease)

DrDrey_102

DrDrey_103

DrDrey_104

DrDrey_105

DrDrey_106
(HNH)

DrDrey_109

DrDrey_110

DrDrey_111

DrDrey_112

DrDrey_113

DrDrey_114
(DnaQ-like exonuclease)

DrDrey_115

DrDrey_116

DrDrey_117

DrDrey_118

DrDrey_119
(RecA)

DrDrey_120

DrDrey_121

DrDrey_122

DrDrey_123

DrDrey_124

DrDrey_125

DrDrey_126

DrDrey_127

DrDrey_128

DrDrey_129

DrDrey_130

DrDrey_131

DrDrey_132
(ParBc domain)

DrDrey_133

DrDrey_134

DrDrey_135

DrDrey_136

DrDrey_137

DrDrey_138

DrDrey_139

DrDrey_140

DrDrey_141

DrDrey_142

DrDrey_143

DrDrey_144

DrDrey_145

DrDrey_146

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKF306380
Refseq NumberNC_022059
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload