Mycobacterium phage Adnama
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Detailed Information for Phage Adnama
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAmanda White
Year Found2014
Location FoundLouisville, KY USA
Finding InstitutionWestern Kentucky University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.281667 N, 85.700389 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 17, 2016
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1633
Genome length (bp)75208
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Lysogeny NotesThis phage could form observable plaques within twenty-four hours. 10^0 and 10^(-1) stocks were usually completely lysed.
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe plaques had clear centers with cloudy halos around the center.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Adnama_1

Adnama_2

Adnama_3

Adnama_4

Adnama_5

Adnama_6
(terminase small subunit)

Adnama_7
(membrane protein)

Adnama_8

Adnama_9

Adnama_10
(terminase large subunit)

Adnama_11

Adnama_12
(portal protein)

Adnama_13
(capsid maturation protease)

Adnama_14
(major capsid protein)

Adnama_15
(head-to-tail connector protein)

Adnama_16
(head-to-tail connector protein)

Adnama_17
(head-to-tail connector protein)

Adnama_18
(head-to-tail connector protein)

Adnama_19
(head-to-tail connector protein)

Adnama_20
(major tail protein)

Adnama_21

Adnama_22
(tail assembly chaperone)

Adnama_23
(tail assembly chaperone)

Adnama_24
(HNH endonuclease)

Adnama_25
(tape measure protein)

Adnama_26
(minor tail protein)

Adnama_27
(minor tail protein)

Adnama_28
(minor tail protein)

Adnama_29
(minor tail protein)

Adnama_30
(minor tail protein)

Adnama_31
(minor tail protein)

Adnama_32

Adnama_33
(helix-turn-helix DNA binding domain protein)

Adnama_34
(membrane protein)

Adnama_35
(lysin A)

Adnama_36
(holin)

Adnama_37

Adnama_38
(lysin B)

Adnama_39
(membrane protein)

Adnama_40
(glutaredoxin)

Adnama_41
(DNA bridging protein)

Adnama_42

Adnama_43

Adnama_44

Adnama_45

Adnama_46

Adnama_47

Adnama_48

Adnama_49

Adnama_50

Adnama_51

Adnama_52

Adnama_53

Adnama_54

Adnama_55
(membrane protein)

Adnama_56
(integrase)

Adnama_57

Adnama_58
(membrane protein)

Adnama_59
(immunity repressor)

Adnama_60

Adnama_61
(membrane protein)

Adnama_62
(pentapeptide repeat protein)

Adnama_63

Adnama_64

Adnama_65

Adnama_66

Adnama_67

Adnama_68

Adnama_69

Adnama_70

Adnama_71

Adnama_72

Adnama_73
(ERF family ssDNA binding protein)

Adnama_74

Adnama_75

Adnama_76

Adnama_77

Adnama_78
(membrane protein)

Adnama_79

Adnama_80
(DNA recombinase)

Adnama_81
(HNH endonuclease)

Adnama_82

Adnama_83

Adnama_84

Adnama_85
(dsDNA helicase)

Adnama_86

Adnama_87
(WhiB family transcription factor)

Adnama_88

Adnama_89

Adnama_90
(holliday junction resolvase)

Adnama_91
(membrane protein)

Adnama_92
(polynucleotide kinase)

Adnama_93

Adnama_94
(membrane protein)

Adnama_95
(RNA ligase)

Adnama_96
(helix-turn-helix DNA binding domain protein)

Adnama_97
(WhiB family transcription factor)

Adnama_98

Adnama_99

Adnama_100

Adnama_101

Adnama_102

Adnama_103
(endonuclease VII)

Adnama_104
(ssDNA binding protein)

Adnama_105
(protease)

Adnama_106

Adnama_107

Adnama_108

Adnama_109

Adnama_110
(HNH endonuclease)

Adnama_113

Adnama_114

Adnama_115

Adnama_116

Adnama_117
(DNA polymerase III subunit)

Adnama_118

Adnama_119
(DNA recombinase)

Adnama_120

Adnama_121

Adnama_122

Adnama_123

Adnama_124

Adnama_125

Adnama_126

Adnama_127

Adnama_128

Adnama_129

Adnama_130

Adnama_131
(helix-turn-helix DNA binding domain protein)

Adnama_132

Adnama_133

Adnama_134

Adnama_135

Adnama_136

Adnama_137

Adnama_138

Adnama_139

Adnama_140

Adnama_141

Adnama_142

Adnama_143

Adnama_144

Adnama_145

Adnama_146

Adnama_147

Adnama_148

Adnama_149

Adnama_150
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH371112
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2014WEKUadnamaAW
SEA Lysate Titer 7.5x10^9
Date of SEA Lysate Titering Oct 14, 2014
Pitt Freezer Box# 10
Pitt Freezer Box Grid# C5
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload