Mycobacterium phage Lilac
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Detailed Information for Phage Lilac
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAna G. Suarez-Diaz
Year Found2009
Location FoundCayey, PR
Finding InstitutionUniversity of Puerto Rico at Cayey
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates18.123897 N, 66.156877 W Map
Discovery NotesSoil isolated from under a tree from 2 centimeters deep.
Temperature 90 degrees Centigrade.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 21, 2011
Sequencing FacilityJoint Genomics Institute
Shotgun Sequencing MethodSanger Sequencing
Genome length (bp)76260
Character of genome ends3' Sticky Overhang
Overhang Length9 bp
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Other Cluster Members
Plaque NotesTurbid plaques approximately 2 mm in diameter after 24 hour incubation at 37 degrees Centigrade.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes140
Number of tRNAs2
Has been Phamerated?Yes
Gene List

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Lilac_1

Lilac_2

Lilac_3

Lilac_4

Lilac_5

Lilac_6

Lilac_7
(terminase, small subunit)

Lilac_8

Lilac_9

Lilac_10
(terminase, large subunit)

Lilac_11

Lilac_12
(Portal)

Lilac_13
(capsid maturation protease)

Lilac_14
(major capsid)

Lilac_15

Lilac_16

Lilac_17

Lilac_18

Lilac_19

Lilac_20
(major tail subunit)

Lilac_21

Lilac_22
(tail assembly chaperone)

Lilac_23
(tail assembly chaperone)

Lilac_24
(tapemeasure)

Lilac_25
(minor tail subunit)

Lilac_26
(minor tail subunit)

Lilac_27
(minor tail subunit)

Lilac_28
(minor tail subunit)

Lilac_29
(D-ala-D-ala carboxypeptidase)

Lilac_30

Lilac_31

Lilac_32

Lilac_33

Lilac_34
(LysA)

Lilac_35
(Holin)

Lilac_36

Lilac_37
(LysB)

Lilac_38

Lilac_39
(NrdH)

Lilac_40
(Lsr2)

Lilac_41

Lilac_42

Lilac_43

Lilac_44

Lilac_45

Lilac_46

Lilac_47

Lilac_48

Lilac_49

Lilac_50

Lilac_51

Lilac_52

Lilac_53

Lilac_54

Lilac_55
(Integrase, Y-int)

Lilac_56

Lilac_57

Lilac_58

Lilac_59

Lilac_60
(Pentapeptide domain)

Lilac_61

Lilac_62

Lilac_63

Lilac_64

Lilac_65

Lilac_66

Lilac_67

Lilac_68

Lilac_69

Lilac_70

Lilac_71
(Erf)

Lilac_72

Lilac_73

Lilac_74

Lilac_75

Lilac_76

Lilac_77

Lilac_78

Lilac_79
(HNH endonuclease domain)

Lilac_80

Lilac_81

Lilac_82

Lilac_83
(DnaB-like helicase)

Lilac_84

Lilac_85

Lilac_86

Lilac_87

Lilac_88

Lilac_89

Lilac_90
(Pnk)

Lilac_91

Lilac_92

Lilac_93

Lilac_94
(RNA ligase)

Lilac_95

Lilac_96
(WhiB)

Lilac_97

Lilac_98

Lilac_99

Lilac_100

Lilac_101
(DNA methyltransferase)

Lilac_102
(ssDNA binding)

Lilac_103
(Clp protease)

Lilac_104

Lilac_105

Lilac_106

Lilac_107

Lilac_110

Lilac_111

Lilac_112

Lilac_113

Lilac_114
(DnaQ-like exonuclease)

Lilac_115

Lilac_116
(RecA)

Lilac_117

Lilac_118

Lilac_119

Lilac_120

Lilac_121

Lilac_122

Lilac_123

Lilac_124

Lilac_125

Lilac_126

Lilac_127
(ParBc domain)

Lilac_128

Lilac_129

Lilac_130

Lilac_131

Lilac_132

Lilac_133

Lilac_134

Lilac_135

Lilac_136

Lilac_137

Lilac_138

Lilac_139

Lilac_140

Lilac_141

Lilac_142

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN382248
Refseq NumberNC_023689
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload