Recently Added Phages

Bingdu Rangel Rennovy Stull Gustav

Recently Modified Phages

OldBen Supernova Klein Kailash Superphikiman

Recently Finished Phages

Synepsis (AU) Brad (AV) KingBob (AK) Herb (AK) Sergei (AK)
Mycobacterium phage Barbarian
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Barbarian
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByVikrant Dhindsa
Year Found2016
Location FoundBlacksburg, VA United States
Finding InstitutionVirginia Tech
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesThis phage was found in Foxridge Apartments in soil. The air temperature was 28C and it was found at a depth of 7cm. The soil was fairly moist
and the site was surrounded by flowers. Lastly, the soil seemed new.
Naming NotesI named my phage Barbarian because he is a very strong and savage-like phage, he created many, small plaques every time he infected the M. smegmatis.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage682
Genome length (bp)74594
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Other Cluster Members
Plaque NotesTemperate
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

Barbarian_1

Barbarian_2

Barbarian_3

Barbarian_4

Barbarian_5
(terminase, small subunit)

Barbarian_6

Barbarian_7

Barbarian_8
(terminase, large subunit)

Barbarian_9

Barbarian_10
(portal protein)

Barbarian_11
(capsid maturation protease)

Barbarian_12
(major capsid protein)

Barbarian_13
(head-to-tail connector protein)

Barbarian_14
(head-to-tail connector protein)

Barbarian_15
(head-to-tail connector protein)

Barbarian_16
(head-to-tail connector protein)

Barbarian_17
(head-to-tail connector protein)

Barbarian_18
(major tail protein)

Barbarian_19
(tail assembly chaperone)

Barbarian_20
(tail assembly chaperone)

Barbarian_21
(tape measure protein)

Barbarian_22
(minor tail protein)

Barbarian_23
(minor tail protein)

Barbarian_24
(minor tail protein)

Barbarian_25
(minor tail protein)

Barbarian_26
(minor tail protein, D-ala-D-ala-carboxypeptidase)

Barbarian_27
(minor tail protein)

Barbarian_28

Barbarian_29
(helix-turn-helix DNA binding protein)

Barbarian_30

Barbarian_31
(lysin A)

Barbarian_32
(holin)

Barbarian_33

Barbarian_34
(lysin B)

Barbarian_35

Barbarian_36
(NrdH glutaredoxin)

Barbarian_37
(Lsr2 DNA bridging protein)

Barbarian_38

Barbarian_39

Barbarian_40

Barbarian_41

Barbarian_42

Barbarian_43

Barbarian_44

Barbarian_45

Barbarian_46

Barbarian_47

Barbarian_48

Barbarian_49

Barbarian_50

Barbarian_51

Barbarian_52
(integrase (Y-int))

Barbarian_53

Barbarian_54
(membrane protein)

Barbarian_55
(immunity repressor)

Barbarian_56

Barbarian_57

Barbarian_58
(pentapeptide repeat protein)

Barbarian_59

Barbarian_60

Barbarian_61

Barbarian_62

Barbarian_63

Barbarian_64

Barbarian_65

Barbarian_66

Barbarian_67

Barbarian_68
(ssDNA binding protein, ERF family)

Barbarian_69

Barbarian_70

Barbarian_71

Barbarian_72

Barbarian_73

Barbarian_74

Barbarian_75

Barbarian_76
(HNH endonuclease)

Barbarian_77

Barbarian_78

Barbarian_79

Barbarian_80
(DnaB dsDNA helicase)

Barbarian_81

Barbarian_82
(WhiB family transcription factor)

Barbarian_83

Barbarian_84

Barbarian_85

Barbarian_86

Barbarian_87
(polynucleotide kinase)

Barbarian_88

Barbarian_89

Barbarian_90
(RNA ligase)

Barbarian_91
(helix-turn-helix DNA binding protein)

Barbarian_92
(WhiB family transcription factor)

Barbarian_93

Barbarian_94

Barbarian_95

Barbarian_96

Barbarian_97

Barbarian_98
(endonuclease VII)

Barbarian_99
(ssDNA binding protein)

Barbarian_100
(ClpP protease)

Barbarian_101

Barbarian_102

Barbarian_103

Barbarian_104

Barbarian_105
(HNH endonuclease)

Barbarian_108

Barbarian_109

Barbarian_110
(hydrolase)

Barbarian_111

Barbarian_112

Barbarian_113
(DnaQ exonuclease (DNA polymerase III subunit))

Barbarian_114

Barbarian_115
(RecA DNA recombinase)

Barbarian_116

Barbarian_117

Barbarian_118

Barbarian_119

Barbarian_120

Barbarian_121

Barbarian_122

Barbarian_123

Barbarian_124

Barbarian_125

Barbarian_126

Barbarian_127
(HTH DNA binding protein)

Barbarian_128

Barbarian_129

Barbarian_130

Barbarian_131

Barbarian_132

Barbarian_133

Barbarian_134

Barbarian_135

Barbarian_136

Barbarian_137

Barbarian_138

Barbarian_139

Barbarian_140

Barbarian_141

Barbarian_142

Barbarian_143

Barbarian_144

Barbarian_145

Barbarian_146
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload