Mycobacterium phage TeardropMSU
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Detailed Information for Phage TeardropMSU
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByFlorence Ogalo and Nandini Surendranathan
Year Found2013
Location FoundMontclair, NJ USA
Finding InstitutionMontclair State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.863056 N, 74.194722 W Map
Discovery NotesIt was found outside of Bohn Hall, a residence hall in Montclair State University.
Naming NotesThis specific phage produces tear drop shaped plaques.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 22, 2014
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage61
Sanger Finishing Reactions6
Genome length (bp)74896
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Other Cluster Members
Plaque NotesThe plaques produced were small around 1.5 mm wide and irregularly shaped similar to teardrops.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

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TeardropMSU_1

TeardropMSU_2

TeardropMSU_3

TeardropMSU_4

TeardropMSU_5
(terminase, small subunit)

TeardropMSU_6

TeardropMSU_7

TeardropMSU_8
(terminase, large subunit)

TeardropMSU_9

TeardropMSU_10
(portal protein)

TeardropMSU_11
(capsid maturation protease)

TeardropMSU_12
(major capsid protein)

TeardropMSU_13
(head-to-tail connector protein)

TeardropMSU_14
(head-to-tail connector protein)

TeardropMSU_15
(head-to-tail connector protein)

TeardropMSU_16
(head-to-tail connector protein)

TeardropMSU_17
(head-to-tail connector protein)

TeardropMSU_18
(major tail subunit)

TeardropMSU_19
(tail assembly chaperone)

TeardropMSU_20
(tail assembly chaperone)

TeardropMSU_21
(tape measure protein)

TeardropMSU_22
(minor tail protein)

TeardropMSU_23
(minor tail protein)

TeardropMSU_24
(minor tail protein)

TeardropMSU_25
(minor tail protein)

TeardropMSU_26
(minor tail protein, D-ala-D-ala carboxypeptidase)

TeardropMSU_27

TeardropMSU_28

TeardropMSU_29

TeardropMSU_30

TeardropMSU_31
(Lysin A)

TeardropMSU_32
(holin)

TeardropMSU_33

TeardropMSU_34
(Lysin B)

TeardropMSU_35

TeardropMSU_36
(NrdH glutaredoxin)

TeardropMSU_37
(Lsr2)

TeardropMSU_38

TeardropMSU_39

TeardropMSU_40

TeardropMSU_41

TeardropMSU_42

TeardropMSU_43

TeardropMSU_44

TeardropMSU_45

TeardropMSU_46

TeardropMSU_47

TeardropMSU_48
(integrase (Y-int))

TeardropMSU_49

TeardropMSU_50

TeardropMSU_51
(immunity repressor)

TeardropMSU_52

TeardropMSU_53

TeardropMSU_54
(pentapeptide repeat protein)

TeardropMSU_55

TeardropMSU_56

TeardropMSU_57

TeardropMSU_58

TeardropMSU_59

TeardropMSU_60

TeardropMSU_61

TeardropMSU_62

TeardropMSU_63

TeardropMSU_64

TeardropMSU_65
(ERF ssDNA binding protein)

TeardropMSU_66

TeardropMSU_67

TeardropMSU_68

TeardropMSU_69

TeardropMSU_70

TeardropMSU_71

TeardropMSU_72

TeardropMSU_73
(HNH homing endonuclease)

TeardropMSU_74

TeardropMSU_75

TeardropMSU_76

TeardropMSU_77
(DnaB helicase)

TeardropMSU_78

TeardropMSU_79
(WhiB transcription factor)

TeardropMSU_80

TeardropMSU_81

TeardropMSU_82

TeardropMSU_83

TeardropMSU_84
(polynucleotide kinase)

TeardropMSU_85

TeardropMSU_86

TeardropMSU_87
(RNA ligase)

TeardropMSU_88

TeardropMSU_89
(WhiB transcription factor)

TeardropMSU_90

TeardropMSU_91

TeardropMSU_92

TeardropMSU_93

TeardropMSU_94

TeardropMSU_95
(DNA methylase)

TeardropMSU_96
(single stranded DNA binding protein)

TeardropMSU_97
(ClpP protease)

TeardropMSU_98

TeardropMSU_99

TeardropMSU_100

TeardropMSU_101

TeardropMSU_102
(HNH homing endonuclease)

TeardropMSU_105

TeardropMSU_106

TeardropMSU_107
(hydrolase)

TeardropMSU_108

TeardropMSU_109

TeardropMSU_110
(DnaQ exonuclease)

TeardropMSU_111

TeardropMSU_112

TeardropMSU_113

TeardropMSU_114

TeardropMSU_115
(RecA recombinase)

TeardropMSU_116

TeardropMSU_117

TeardropMSU_118

TeardropMSU_119

TeardropMSU_120

TeardropMSU_121

TeardropMSU_122

TeardropMSU_123

TeardropMSU_124

TeardropMSU_125

TeardropMSU_126

TeardropMSU_127

TeardropMSU_128

TeardropMSU_129

TeardropMSU_130

TeardropMSU_131

TeardropMSU_132

TeardropMSU_133

TeardropMSU_134

TeardropMSU_135

TeardropMSU_136

TeardropMSU_137

TeardropMSU_138

TeardropMSU_139

TeardropMSU_140

TeardropMSU_141

TeardropMSU_142

TeardropMSU_143

TeardropMSU_144

TeardropMSU_145

Submitted Annotation in DNA Master FormatDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU865303
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
EM PictureDownload