Mycobacterium phage Nala
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Nala
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByBalashova N, Johnson E, Nieh A, Yu A
Year Found2011
Location FoundLos Angeles, CA USA
Finding InstitutionUniversity of California, Los Angeles
ProgramUnavailable
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates34.0694 N, 118.4849 W Map
Discovery NotesPhage isolation performed by Nataliya Balashova, Elizabeth Johnson, Angela Nieh, and Angela Yu (Spring 2011). DNA preparation performed by Krisanavane Reddi. Assembly performed by William Villella (UCLA) and confirmed by Charles Bowman (University of Pittsburgh). Preliminary genome annotation performed by Max Bachour, Sophia Giang, Regina Lee, and Rebecca Lozingot (Winter 2012). Final annotation analysis performed by Debbie Jacobs-Sera (University of Pittsburgh).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 5, 2013
Sequencing FacilityThe UCLA Genotyping and Sequencing Core
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage357
Genome length (bp)75894
Character of genome ends3' Sticky Overhang
Overhang Length9 bp
Overhang SequenceCGCTTGTCA
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Other Cluster Members
Plaque NotesLarge clear plaques with turbid halos, mixed sizes.
Average plaque sizes not reported.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes147
Number of tRNAs2
Has been Phamerated?Yes
Gene List

Click to View

Nala_1

Nala_2

Nala_3

Nala_4

Nala_5
(Terminase, small subunit)

Nala_6

Nala_7

Nala_8
(Terminse, large subunit)

Nala_9

Nala_10
(Portal)

Nala_11
(Capsid Maturation Protease)

Nala_12
(Major Capsid)

Nala_13

Nala_14

Nala_15

Nala_16

Nala_17

Nala_18
(Major Tail)

Nala_19
(Tail Assembly Chaperone)

Nala_20
(Tail Assembly Chaperone)

Nala_21
(HNH)

Nala_22
(Tapemeasure)

Nala_23
(Minor Tail)

Nala_24
(Minor Tail)

Nala_25
(Minor Tail)

Nala_26
(Minor Tail)

Nala_27
(D-ala-D-ala carboxypeptidase)

Nala_28

Nala_29

Nala_30

Nala_31

Nala_32
(LysA)

Nala_33
(Holin)

Nala_34

Nala_35
(LysB)

Nala_36

Nala_37
(NrdH)

Nala_38
(Lsr2-like)

Nala_39

Nala_40

Nala_41

Nala_42

Nala_43

Nala_44

Nala_45

Nala_46

Nala_47

Nala_48

Nala_49

Nala_50

Nala_51

Nala_52

Nala_53
(Integrase (Y-Int))

Nala_54

Nala_55

Nala_56

Nala_57

Nala_58

Nala_59
(Pentapeptide repeat)

Nala_60

Nala_61

Nala_62

Nala_63

Nala_64

Nala_65

Nala_66

Nala_67

Nala_68

Nala_69

Nala_70

Nala_71
(Erf)

Nala_72

Nala_73

Nala_74

Nala_75

Nala_76

Nala_77

Nala_78

Nala_79
(HNH domain)

Nala_80

Nala_81

Nala_82

Nala_83

Nala_84

Nala_85

Nala_86

Nala_87

Nala_88

Nala_89

Nala_90
(Pnk)

Nala_91

Nala_92

Nala_93
(RNA ligase)

Nala_94

Nala_95
(WhiB)

Nala_96

Nala_97

Nala_98

Nala_99

Nala_100

Nala_101
(DNA methylase)

Nala_102
(ssDNA binding)

Nala_103
(Clp protease)

Nala_104

Nala_105

Nala_106

Nala_107

Nala_108

Nala_111

Nala_112

Nala_113

Nala_114

Nala_115
(DnaQ-like)

Nala_116

Nala_117
(RecA)

Nala_118

Nala_119

Nala_120

Nala_121

Nala_122

Nala_123

Nala_124

Nala_125

Nala_126

Nala_127

Nala_128

Nala_129

Nala_130

Nala_131

Nala_132

Nala_133

Nala_134

Nala_135

Nala_136

Nala_137

Nala_138

Nala_139

Nala_140

Nala_141

Nala_142

Nala_143

Nala_144

Nala_145

Nala_146

Nala_147

Nala_148

Nala_149
(HNH domain)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKF562101
Refseq NumberNC_022976
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload