| Detailed Information for Phage JDog |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Jersey Lessenger |
| Year Found | 2023 |
| Location Found | Fruitland, IA United States |
| Finding Institution | Culver-Stockton College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 41.3506 N, 91.13083 W Map |
| Discovery Notes | -Collected from a compost sight in Fruitland Iowa.
-Sandy, dark, dusty
-78° Partially cloudy, No precipitation in the past 24 hrs |
| Naming Notes | It is a nickname that people gave me on my team. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 20, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 637 |
| Genome length (bp) | 68613 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Culver-Stockton College |
| Annotation Status | In GenBank |
| Plaque Notes | 4mm, lytic, clear |
| Morphotype | Siphoviridae |
| Number of Genes | 100 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP978773 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
168 |
| Pitt Freezer Box Grid# |
C12 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |