Detailed Information for Phage Lars |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Robert L. Sjoholm |
Year Found | 2008 |
Location Found | Holland, MI USA |
Finding Institution | Hope College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 42.7873 N, 86.1082 W Map |
Discovery Notes | From soil, depth 2.5cm, in Centennial Park; under northern white canopy. 23°C |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 5, 2020 |
Sequencing Facility | Hope College |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 699 |
Genome length (bp) | 67468 |
Character of genome ends | Circularly Permuted |
GC Content | 68.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B2 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Howard University |
Annotation Status | In GenBank |
Plaque Notes | (0.5-1.5mm/clear/24 hr/37°C) |
Morphotype | Siphoviridae |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MW712731 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Designator |
2008HOPElarsRLS |
SEA Lysate Titer |
9.0e9 |
Pitt Freezer Box# |
3 |
Pitt Freezer Box Grid# |
56 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |