Mycobacterium phage Adlitam
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Detailed Information for Phage Adlitam
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAliza De Vries
Year Found2016
Location FoundNewburgh, NY USA
Finding InstitutionMount Saint Mary College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.51 N, 74.01 W Map
Discovery NotesI collected soil samples from my schools campus from under the tree.
Dry soil.
Approx. 80 degrees
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 1, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage505
Genome length (bp)155007
Character of genome endsUnknown
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BackyardAgain (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Janiyra (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesThe morphologies were small.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Adlitam_1

Adlitam_2

Adlitam_3
(nucleotidyltransferase)

Adlitam_4

Adlitam_5
(histidine triad nucleotide binding protein)

Adlitam_6

Adlitam_7

Adlitam_8

Adlitam_9

Adlitam_10

Adlitam_11

Adlitam_12

Adlitam_13

Adlitam_14

Adlitam_15

Adlitam_16

Adlitam_17

Adlitam_18

Adlitam_19

Adlitam_20

Adlitam_21

Adlitam_22

Adlitam_23

Adlitam_24

Adlitam_25
(HNH endonuclease)

Adlitam_26

Adlitam_27

Adlitam_28

Adlitam_29

Adlitam_30

Adlitam_31
(helix-turn-helix DNA binding protein)

Adlitam_32

Adlitam_33

Adlitam_34

Adlitam_35
(ribbon-helix-helix DNA binding domain protein)

Adlitam_36

Adlitam_37

Adlitam_38

Adlitam_39

Adlitam_40

Adlitam_41

Adlitam_42

Adlitam_43

Adlitam_44

Adlitam_45

Adlitam_46

Adlitam_47

Adlitam_48

Adlitam_49

Adlitam_50

Adlitam_51

Adlitam_52

Adlitam_53

Adlitam_54

Adlitam_55
(helix-turn-helix DNA binding protein)

Adlitam_56

Adlitam_57

Adlitam_58

Adlitam_59

Adlitam_60

Adlitam_61

Adlitam_62
(helix-turn-helix DNA binding protein)

Adlitam_63
(helix-turn-helix DNA binding protein)

Adlitam_64

Adlitam_65

Adlitam_66

Adlitam_67

Adlitam_68

Adlitam_69

Adlitam_70

Adlitam_71

Adlitam_72

Adlitam_73

Adlitam_74

Adlitam_75

Adlitam_76

Adlitam_77

Adlitam_78

Adlitam_79

Adlitam_80

Adlitam_81

Adlitam_82

Adlitam_83

Adlitam_88
(methyltransferase)

Adlitam_89

Adlitam_90
(portal protein)

Adlitam_91

Adlitam_92

Adlitam_93
(ThyX-like thymidylate synthase)

Adlitam_94

Adlitam_95
(RNA ligase)

Adlitam_96
(HNH endonuclease)

Adlitam_97
(LysM-domain protein)

Adlitam_98

Adlitam_99

Adlitam_100
(major capsid protein)

Adlitam_101
(capsid decoration protein)

Adlitam_102

Adlitam_103

Adlitam_104

Adlitam_105

Adlitam_106

Adlitam_107

Adlitam_108
(membrane protein)

Adlitam_109

Adlitam_110

Adlitam_111

Adlitam_112

Adlitam_113

Adlitam_114

Adlitam_115

Adlitam_116

Adlitam_117

Adlitam_118

Adlitam_119

Adlitam_120

Adlitam_121
(N-acetyltransferase)

Adlitam_122

Adlitam_123

Adlitam_124

Adlitam_125

Adlitam_126

Adlitam_127

Adlitam_128
(tail sheath protein)

Adlitam_129

Adlitam_130

Adlitam_131
(tail assembly chaperone)

Adlitam_132
(tail assembly chaperone)

Adlitam_133
(tape measure protein)

Adlitam_134
(minor tail protein)

Adlitam_135

Adlitam_136

Adlitam_137
(minor tail protein)

Adlitam_138

Adlitam_139

Adlitam_140
(baseplate wedge protein)

Adlitam_141
(baseplate wedge protein)

Adlitam_142

Adlitam_143

Adlitam_144

Adlitam_145
(minor tail protein)

Adlitam_146
(minor tail protein)

Adlitam_147

Adlitam_148

Adlitam_149

Adlitam_150

Adlitam_151

Adlitam_152

Adlitam_153

Adlitam_157

Adlitam_158
(peptidyl tRNA hydrolase)

Adlitam_173

Adlitam_174

Adlitam_186

Adlitam_187
(helicase)

Adlitam_188

Adlitam_189

Adlitam_190

Adlitam_191

Adlitam_192

Adlitam_193

Adlitam_194

Adlitam_195

Adlitam_196
(thymidylate kinase)

Adlitam_197
(aminotransferase)

Adlitam_198
(RNA binding domain protein)

Adlitam_199

Adlitam_200

Adlitam_201
(DnaC-like helicase loader)

Adlitam_202
(DnaB-like dsDNA helicase)

Adlitam_203

Adlitam_204
(DNA primase)

Adlitam_205

Adlitam_206
(DnaJ-like chaperonin)

Adlitam_207
(ssDNA binding domain protein)

Adlitam_208
(DNA polymerase III (alpha))

Adlitam_209
(RF-1 peptide chain release factor)

Adlitam_210
(RecA-like DNA recombinase)

Adlitam_211
(holliday junction resolvase)

Adlitam_212

Adlitam_213
(HNH endonuclease)

Adlitam_214
(RusA-like resolvase)

Adlitam_215

Adlitam_216

Adlitam_217

Adlitam_218

Adlitam_219
(glycoside hydrolase)

Adlitam_220

Adlitam_221
(HNH endonuclease)

Adlitam_222

Adlitam_225

Adlitam_226

Adlitam_227

Adlitam_228

Adlitam_229

Adlitam_230

Adlitam_231

Adlitam_232

Adlitam_233
(Ro-like RNA binding protein)

Adlitam_234

Adlitam_235

Adlitam_236

Adlitam_237

Adlitam_238

Adlitam_239

Adlitam_240
(galactosaminyltransferase)

Adlitam_241

Adlitam_242
(glycosyltransferase)

Adlitam_243
(galactosyltransferase)

Adlitam_244
(nicotinate ribosyltransferase)

Adlitam_245
(glycosyltransferase)

Adlitam_246

Adlitam_247

Adlitam_248

Adlitam_249

Adlitam_250
(lysin A)

Adlitam_251
(membrane protein)

Adlitam_252
(lysin B)

Adlitam_253
(terminase)

Adlitam_254

Adlitam_255

Adlitam_256

Adlitam_257

Adlitam_258
(polynucleotide kinase)

Adlitam_259

Adlitam_260

Adlitam_261
(serine/threonine kinase)

Adlitam_262

Adlitam_263

Adlitam_264
(adenylosuccinate synthetase)

Adlitam_265

Adlitam_266

Adlitam_267

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK450427
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.53x10^11
Pitt Freezer Box# 35
Pitt Freezer Box Grid# E2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload