Mycobacterium phage ValleyTerrace
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Detailed Information for Phage ValleyTerrace
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMarjorie Calle and Caleb Hughes
Year Found2017
Location FoundSpring Valley , NY USA
Finding InstitutionRockland Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.127772 N, 74.088504 W Map
Discovery Notes-Night time
-Cold
-Humid Weather
-Soil was collected after 5cm of digging
-Rained the night before
-Soil was enriched since it was a flowerbed
Naming NotesWe chose this name in regards to the party hall in which we collected the sample.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 26, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage820
Genome length (bp)154553
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BackyardAgain (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Janiyra (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionRockland Community College
Annotation StatusIn GenBank
Plaque NotesMedium plaques with lysogenic behavior.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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ValleyTerrace_1

ValleyTerrace_2

ValleyTerrace_3
(nucleotidyltransferase)

ValleyTerrace_4

ValleyTerrace_5

ValleyTerrace_6

ValleyTerrace_7

ValleyTerrace_8

ValleyTerrace_9

ValleyTerrace_10

ValleyTerrace_11

ValleyTerrace_12

ValleyTerrace_13

ValleyTerrace_14

ValleyTerrace_15

ValleyTerrace_16

ValleyTerrace_17
(histidine triad nucleotide binding protein)

ValleyTerrace_18

ValleyTerrace_19

ValleyTerrace_20

ValleyTerrace_21

ValleyTerrace_22

ValleyTerrace_23

ValleyTerrace_24

ValleyTerrace_25

ValleyTerrace_26

ValleyTerrace_27

ValleyTerrace_28

ValleyTerrace_29

ValleyTerrace_30

ValleyTerrace_31
(helix-turn-helix DNA binding protein)

ValleyTerrace_32

ValleyTerrace_33

ValleyTerrace_34

ValleyTerrace_35
(ribbon-helix-helix DNA binding domain protein)

ValleyTerrace_36

ValleyTerrace_37

ValleyTerrace_38

ValleyTerrace_39

ValleyTerrace_40

ValleyTerrace_41

ValleyTerrace_42

ValleyTerrace_43

ValleyTerrace_44

ValleyTerrace_45

ValleyTerrace_46

ValleyTerrace_47

ValleyTerrace_48

ValleyTerrace_49

ValleyTerrace_50

ValleyTerrace_51

ValleyTerrace_52

ValleyTerrace_53

ValleyTerrace_54

ValleyTerrace_55
(helix-turn-helix DNA binding protein)

ValleyTerrace_56

ValleyTerrace_57

ValleyTerrace_58

ValleyTerrace_59

ValleyTerrace_60

ValleyTerrace_61

ValleyTerrace_62
(helix-turn-helix DNA binding domain protein)

ValleyTerrace_63
(helix-turn-helix DNA binding domain protein)

ValleyTerrace_64

ValleyTerrace_65

ValleyTerrace_66

ValleyTerrace_67

ValleyTerrace_68

ValleyTerrace_69

ValleyTerrace_70

ValleyTerrace_71

ValleyTerrace_72

ValleyTerrace_73

ValleyTerrace_74

ValleyTerrace_75

ValleyTerrace_76

ValleyTerrace_77

ValleyTerrace_78

ValleyTerrace_79

ValleyTerrace_80

ValleyTerrace_81

ValleyTerrace_82

ValleyTerrace_83

ValleyTerrace_88
(methyltransferase)

ValleyTerrace_89

ValleyTerrace_90
(portal protein)

ValleyTerrace_91

ValleyTerrace_92

ValleyTerrace_93
(ThyX-like thymidylate synthase)

ValleyTerrace_94

ValleyTerrace_95
(RNA ligase)

ValleyTerrace_96

ValleyTerrace_97
(LysM-domain protein)

ValleyTerrace_98

ValleyTerrace_99

ValleyTerrace_100
(major capsid protein)

ValleyTerrace_101
(capsid decoration protein)

ValleyTerrace_102

ValleyTerrace_103

ValleyTerrace_104

ValleyTerrace_105

ValleyTerrace_106

ValleyTerrace_107

ValleyTerrace_108
(membrane protein)

ValleyTerrace_109

ValleyTerrace_110

ValleyTerrace_111

ValleyTerrace_112

ValleyTerrace_113

ValleyTerrace_114

ValleyTerrace_115

ValleyTerrace_116

ValleyTerrace_117

ValleyTerrace_118

ValleyTerrace_119

ValleyTerrace_120

ValleyTerrace_121
(N-acetyltransferase)

ValleyTerrace_122

ValleyTerrace_123

ValleyTerrace_124

ValleyTerrace_125

ValleyTerrace_126

ValleyTerrace_127

ValleyTerrace_128
(tail sheath protein)

ValleyTerrace_129

ValleyTerrace_130

ValleyTerrace_131
(tail assembly chaperone)

ValleyTerrace_132
(tail assembly chaperone)

ValleyTerrace_133
(tape measure protein)

ValleyTerrace_134
(minor tail protein)

ValleyTerrace_135

ValleyTerrace_136

ValleyTerrace_137
(minor tail protein)

ValleyTerrace_138

ValleyTerrace_139

ValleyTerrace_140
(baseplate wedge protein)

ValleyTerrace_141
(baseplate wedge protein)

ValleyTerrace_142

ValleyTerrace_143

ValleyTerrace_144

ValleyTerrace_145
(minor tail protein)

ValleyTerrace_146
(minor tail protein)

ValleyTerrace_147

ValleyTerrace_148

ValleyTerrace_149

ValleyTerrace_150

ValleyTerrace_151

ValleyTerrace_152

ValleyTerrace_153

ValleyTerrace_157

ValleyTerrace_158
(peptidyl tRNA hydrolase)

ValleyTerrace_172
(HNH endonuclease)

ValleyTerrace_174
(D-ala-D-ala carboxypeptidase)

ValleyTerrace_175

ValleyTerrace_187

ValleyTerrace_188
(helicase)

ValleyTerrace_189

ValleyTerrace_190

ValleyTerrace_191

ValleyTerrace_192

ValleyTerrace_193

ValleyTerrace_194

ValleyTerrace_195

ValleyTerrace_196

ValleyTerrace_197

ValleyTerrace_198
(thymidylate kinase)

ValleyTerrace_199
(aminotransferase)

ValleyTerrace_200
(RNA binding domain protein)

ValleyTerrace_201

ValleyTerrace_202

ValleyTerrace_203
(DnaC-like helicase loader)

ValleyTerrace_204
(DnaB-like dsDNA helicase)

ValleyTerrace_205

ValleyTerrace_206
(DNA primase)

ValleyTerrace_207

ValleyTerrace_208
(DnaJ-like chaperonin)

ValleyTerrace_209
(ssDNA binding domain protein)

ValleyTerrace_210
(DNA polymerase III (alpha))

ValleyTerrace_211
(Rf-1 peptide chain release factor)

ValleyTerrace_212
(RecA-like DNA recombinase)

ValleyTerrace_213
(holliday junction resolvase)

ValleyTerrace_214

ValleyTerrace_215
(HNH endonuclease)

ValleyTerrace_216
(RusA-like resolvase)

ValleyTerrace_217

ValleyTerrace_218

ValleyTerrace_219

ValleyTerrace_220

ValleyTerrace_221
(glycoside hydrolase)

ValleyTerrace_222

ValleyTerrace_223

ValleyTerrace_226

ValleyTerrace_227

ValleyTerrace_228

ValleyTerrace_229

ValleyTerrace_230

ValleyTerrace_231

ValleyTerrace_232

ValleyTerrace_233

ValleyTerrace_234
(Ro-like RNA binding protein)

ValleyTerrace_235

ValleyTerrace_236

ValleyTerrace_237

ValleyTerrace_238

ValleyTerrace_239

ValleyTerrace_240

ValleyTerrace_241
(galactosaminyltransferase)

ValleyTerrace_242

ValleyTerrace_243
(glycosyltransferase)

ValleyTerrace_244
(galactosyltransferase)

ValleyTerrace_245
(nicotinate ribosyltransferase)

ValleyTerrace_246
(glycosyltransferase)

ValleyTerrace_247

ValleyTerrace_248

ValleyTerrace_249

ValleyTerrace_250

ValleyTerrace_251
(lysin A)

ValleyTerrace_252
(membrane protein)

ValleyTerrace_253
(lysin B)

ValleyTerrace_254
(terminase)

ValleyTerrace_255

ValleyTerrace_256

ValleyTerrace_257

ValleyTerrace_258

ValleyTerrace_259
(polynucleotide kinase)

ValleyTerrace_260

ValleyTerrace_261
(serine/threonine kinase)

ValleyTerrace_262

ValleyTerrace_263

ValleyTerrace_264
(adenylosuccinate synthetase)

ValleyTerrace_265

ValleyTerrace_266

ValleyTerrace_267

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK450432
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 67
Pitt Freezer Box Grid# A1
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload