Detailed Information for Phage Shifa |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Shazia Mansoor |
Year Found | 2018 |
Location Found | Durban, South Africa |
Finding Institution | University of Kwazulu-Natal |
Program | Mycobacterial Genetics Course, Durban, South Africa |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 29.866157 S, 30.981736 E Map |
Discovery Notes | The soil sample was collected from the side of the entrance to F Block, University of KwaZulu-Natal, Westville. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 28, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 430 |
Genome length (bp) | 154859 |
Character of genome ends | Circularly Permuted |
GC Content | 64.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Myoviridae |
Number of Genes | 207 |
Number of tRNAs | 34 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT889395 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
GenBank File for Phamerator | Download |