Mycobacterium phage Shaqnato
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Detailed Information for Phage Shaqnato
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesMyoseinge and Sinoseinge
Found ByShaquille Fyfe
Year Found2017
Location FoundRiverside, CA United States
Finding InstitutionLa Sierra University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.910183 N, 117.500914 W Map
Discovery NotesOn January 9, 2017 6:35pm, the researcher stumbled across wet loamy soil between the Administration building and Calkins, La Sierra University campus. The temperature was 12.7 degrees Celsius. The sample was collected 1-2 inches below the surface.
Naming NotesThe name 'myoseinge' derive from two words: myo and seinn. The scientific prefix myo meaning muscles symbolizes 'strong and hard-working'. Seinn is an old Norse word meaning slow or late as it is used to describe the character of the phage
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 10, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage650
Genome length (bp)155596
Character of genome endsCircularly Permuted
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

Linnaeus (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

MoBama (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

SuperCallie (None)

TinyC (None)

Trilla23 (None)

Turret (None)

RetimsGems (A1)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Donegal (C1)

Doodle1 (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HarrySpotter (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Jessibeth14 (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Lionheart (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

MrsHay (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

OaklaforG (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

SandySandal (C1)

Sauce (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Feauphix (C2)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Annotation StatusIn GenBank
Plaque NotesSmall plaques with very clear margins.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Shaqnato_1

Shaqnato_2

Shaqnato_3
(nucleotidyltransferase)

Shaqnato_4

Shaqnato_5

Shaqnato_6

Shaqnato_7

Shaqnato_8

Shaqnato_9

Shaqnato_10

Shaqnato_11

Shaqnato_12

Shaqnato_13

Shaqnato_14

Shaqnato_15

Shaqnato_16

Shaqnato_17

Shaqnato_18

Shaqnato_19

Shaqnato_20

Shaqnato_21

Shaqnato_22

Shaqnato_23

Shaqnato_24

Shaqnato_25

Shaqnato_26

Shaqnato_27
(helix-turn-helix DNA binding protein)

Shaqnato_28

Shaqnato_29

Shaqnato_30

Shaqnato_31
(ribbon-helix-helix DNA binding domain)

Shaqnato_32

Shaqnato_33

Shaqnato_34

Shaqnato_35

Shaqnato_36

Shaqnato_37

Shaqnato_38

Shaqnato_39

Shaqnato_40

Shaqnato_41

Shaqnato_42

Shaqnato_43

Shaqnato_44

Shaqnato_45

Shaqnato_46

Shaqnato_47

Shaqnato_48

Shaqnato_49

Shaqnato_50
(helix-turn-helix DNA binding protein)

Shaqnato_51

Shaqnato_52

Shaqnato_53

Shaqnato_54

Shaqnato_55

Shaqnato_56

Shaqnato_57
(helix-turn-helix DNA binding domain)

Shaqnato_58
(helix-turn-helix DNA binding domain)

Shaqnato_59

Shaqnato_60

Shaqnato_61

Shaqnato_62

Shaqnato_63

Shaqnato_64

Shaqnato_65

Shaqnato_66

Shaqnato_67

Shaqnato_68

Shaqnato_69

Shaqnato_70

Shaqnato_71

Shaqnato_72

Shaqnato_73

Shaqnato_74

Shaqnato_75

Shaqnato_80
(methyltransferase)

Shaqnato_81

Shaqnato_82
(portal protein)

Shaqnato_83

Shaqnato_84

Shaqnato_85
(ThyX-like thymidylate synthase)

Shaqnato_86

Shaqnato_87
(RNA ligase)

Shaqnato_88

Shaqnato_89
(Lys M domain)

Shaqnato_90

Shaqnato_91

Shaqnato_92
(major capsid protein)

Shaqnato_93
(Holliday junction resolvase)

Shaqnato_94
(capsid decoration protein)

Shaqnato_95

Shaqnato_96

Shaqnato_97

Shaqnato_98

Shaqnato_99

Shaqnato_100

Shaqnato_101
(membrane protein)

Shaqnato_102

Shaqnato_103

Shaqnato_104

Shaqnato_105

Shaqnato_106

Shaqnato_107

Shaqnato_108

Shaqnato_109

Shaqnato_110

Shaqnato_111

Shaqnato_112

Shaqnato_113

Shaqnato_114
(N-acetyltransferase)

Shaqnato_115

Shaqnato_116

Shaqnato_117

Shaqnato_118

Shaqnato_119

Shaqnato_120
(tail sheath protein)

Shaqnato_121

Shaqnato_122

Shaqnato_123
(tail assembly chaperone)

Shaqnato_124
(tape measure chaperone)

Shaqnato_125
(tape measure protein)

Shaqnato_126
(minor tail protein)

Shaqnato_127

Shaqnato_128

Shaqnato_129
(minor tail protein)

Shaqnato_130

Shaqnato_131

Shaqnato_132
(baseplate wedge protein)

Shaqnato_133
(baseplate wedge protein)

Shaqnato_134

Shaqnato_135

Shaqnato_136

Shaqnato_137

Shaqnato_138
(minor tail protein)

Shaqnato_139
(minor tail protein)

Shaqnato_140

Shaqnato_141

Shaqnato_142

Shaqnato_143

Shaqnato_144

Shaqnato_145

Shaqnato_146

Shaqnato_150

Shaqnato_151
(peptidyl tRNA hydrolase)

Shaqnato_166
(minor tail protein, D-ala-D-ala carboxypeptidase)

Shaqnato_167

Shaqnato_179

Shaqnato_180
(helicase)

Shaqnato_181

Shaqnato_182

Shaqnato_183

Shaqnato_184

Shaqnato_185

Shaqnato_186

Shaqnato_187

Shaqnato_188

Shaqnato_189
(thymidylate kinase)

Shaqnato_190
(aminotransferase)

Shaqnato_191
(RNA binding domain)

Shaqnato_192

Shaqnato_193
(DnaC-like helicase loader)

Shaqnato_194
(DnaB-like dsDNA helicase)

Shaqnato_195

Shaqnato_196
(DNA primase)

Shaqnato_197

Shaqnato_198
(chaperonin DnaJ-like)

Shaqnato_199
(ssDNA binding domain)

Shaqnato_200
(DNA polymerase III (alpha))

Shaqnato_201
(Rf-1 peptide chain release factor)

Shaqnato_202
(RecA-like DNA recombinase)

Shaqnato_203
(Holliday junction resolvase)

Shaqnato_204

Shaqnato_205
(HNH endonuclease)

Shaqnato_206
(RusA-like resolvase)

Shaqnato_207

Shaqnato_208

Shaqnato_209

Shaqnato_210

Shaqnato_211
(glycoside hydrolase)

Shaqnato_212

Shaqnato_213

Shaqnato_216

Shaqnato_217

Shaqnato_218

Shaqnato_219

Shaqnato_220

Shaqnato_221

Shaqnato_222

Shaqnato_223

Shaqnato_224
(Ro-like RNA binding protein)

Shaqnato_225

Shaqnato_226

Shaqnato_227

Shaqnato_228

Shaqnato_229

Shaqnato_230

Shaqnato_231
(galactosaminyltransferase)

Shaqnato_232

Shaqnato_233
(glycosyltransferase)

Shaqnato_234
(galactosyltransferase)

Shaqnato_235
(nicotinate ribosyltransferase)

Shaqnato_236
(glycosyltransferase)

Shaqnato_237

Shaqnato_238

Shaqnato_239

Shaqnato_240

Shaqnato_241
(lysin A)

Shaqnato_242
(membrane protein)

Shaqnato_243
(lysin B)

Shaqnato_244
(terminase)

Shaqnato_245

Shaqnato_246

Shaqnato_247

Shaqnato_248

Shaqnato_249
(polynucleotide kinase)

Shaqnato_250

Shaqnato_251

Shaqnato_252
(serine/threonine kinase)

Shaqnato_253

Shaqnato_254

Shaqnato_255
(adenylosuccinate synthetase)

Shaqnato_256

Shaqnato_257

Shaqnato_258

Shaqnato_259

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359308
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.33x10^10
Date of SEA Lysate Titering Feb 10, 2017
Pitt Freezer Box# 45
Pitt Freezer Box Grid# C8
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload