Detailed Information for Phage Rabinovish |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Victoria Reed |
Year Found | 2017 |
Location Found | Media, PA USA |
Finding Institution | University of the Sciences (now St. Joseph's Univ) |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.2503 N, 75.1666 W Map |
Discovery Notes | Soil sample was retrieved on the side of a house in a suburban area. Soil in contact with dogs and people.
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Naming Notes | The soil came from my friend's backyard, so I named my phage after her. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 12, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 81 |
Genome length (bp) | 154861 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Sequencing Notes | This phage was sequenced as part of a mixed DOGEMS sample. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of the Sciences (now St. Joseph's Univ) |
Annotation Status | In GenBank |
Morphotype | Myoviridae |
Number of Genes | 229 |
Number of tRNAs | 28 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH590593 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
47 |
Pitt Freezer Box Grid# |
E1 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |