Mycobacterium phage Rahel
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Detailed Information for Phage Rahel
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Duplicates of this PhageJamieOW
Found ByJane Thomas
Year Found2017
Location FoundHicksville, NY USA
Finding InstitutionSUNY Old Westbury
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.7679 N, 73.5405 W Map
Discovery NotesThe soil was from my backyard in a flowerbed which was in an undisturbed location. It was a little wet.
Naming Notesit is after my great grandmother
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage471
Genome length (bp)155955
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionSUNY Old Westbury
Annotation StatusIn GenBank
Plaque Notesreally small (diameter is approx. 1 mm), round in shape, clear outline
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Rahel_1

Rahel_2

Rahel_3
(nucleotidyltransferase)

Rahel_4

Rahel_5

Rahel_6

Rahel_7

Rahel_8

Rahel_9

Rahel_10

Rahel_11

Rahel_12

Rahel_13

Rahel_14

Rahel_15

Rahel_16

Rahel_17
(histidine triad nucleotide binding protein)

Rahel_18

Rahel_19

Rahel_20

Rahel_21

Rahel_22

Rahel_23

Rahel_24

Rahel_25
(HNH endonuclease)

Rahel_26

Rahel_27

Rahel_28

Rahel_29
(membrane protein)

Rahel_30

Rahel_31
(helix-turn-helix DNA binding protein)

Rahel_32

Rahel_33

Rahel_34

Rahel_35
(ribbon-helix-helix DNA binding domain protein)

Rahel_36

Rahel_37

Rahel_38

Rahel_39

Rahel_40

Rahel_41

Rahel_42

Rahel_43

Rahel_44

Rahel_45

Rahel_46

Rahel_47

Rahel_48

Rahel_49

Rahel_50

Rahel_51

Rahel_52

Rahel_53

Rahel_54

Rahel_55

Rahel_56
(helix-turn-helix DNA binding protein)

Rahel_57

Rahel_58

Rahel_59

Rahel_60

Rahel_61

Rahel_62

Rahel_63
(helix-turn-helix DNA binding domain protein)

Rahel_64
(helix-turn-helix DNA binding domain protein)

Rahel_65

Rahel_66

Rahel_67

Rahel_68

Rahel_69

Rahel_70

Rahel_71

Rahel_72

Rahel_73

Rahel_74

Rahel_75

Rahel_76

Rahel_77

Rahel_78

Rahel_79

Rahel_80

Rahel_81

Rahel_82

Rahel_87
(methyltransferase)

Rahel_88

Rahel_89
(portal protein)

Rahel_90

Rahel_91

Rahel_92
(ThyX-like thymidylate synthase)

Rahel_93

Rahel_94
(RNA ligase)

Rahel_95
(HNH endonuclease)

Rahel_96
(LysM domain protein)

Rahel_97

Rahel_98

Rahel_99
(major capsid protein)

Rahel_100
(capsid decoration protein)

Rahel_101

Rahel_102

Rahel_103

Rahel_104

Rahel_105

Rahel_106

Rahel_107
(membrane protein)

Rahel_108

Rahel_109

Rahel_110

Rahel_111

Rahel_112

Rahel_113

Rahel_114

Rahel_115

Rahel_116

Rahel_117

Rahel_118

Rahel_119

Rahel_120
(N-acetyltransferase)

Rahel_121

Rahel_122

Rahel_123

Rahel_124

Rahel_125

Rahel_126
(tail sheath protein)

Rahel_127

Rahel_128

Rahel_129
(tail assembly chaperone)

Rahel_130
(tail assembly chaperone)

Rahel_131
(tape measure protein)

Rahel_132
(minor tail protein)

Rahel_133

Rahel_134

Rahel_135
(minor tail protein)

Rahel_136

Rahel_137

Rahel_138
(baseplate wedge protein)

Rahel_139
(baseplate wedge protein)

Rahel_140

Rahel_141

Rahel_142

Rahel_143
(minor tail protein)

Rahel_144
(minor tail protein)

Rahel_145

Rahel_146

Rahel_147

Rahel_148

Rahel_149

Rahel_150

Rahel_151

Rahel_152

Rahel_153
(membrane protein)

Rahel_155

Rahel_158

Rahel_159
(peptidyl tRNA hydrolase)

Rahel_165

Rahel_175
(D-ala-D-ala carboxypeptidase)

Rahel_176

Rahel_188

Rahel_189
(helicase)

Rahel_190

Rahel_191

Rahel_192

Rahel_193

Rahel_194

Rahel_195

Rahel_196

Rahel_197

Rahel_198
(thymidylate kinase)

Rahel_199
(aminotransferase)

Rahel_200
(RNA binding domain protein)

Rahel_201

Rahel_202

Rahel_203
(DnaC-like helicase loader)

Rahel_204
(DnaB-like dsDNA helicase)

Rahel_205

Rahel_206
(DNA primase)

Rahel_207

Rahel_208
(DnaJ-like chaperonin)

Rahel_209
(ssDNA binding domain protein)

Rahel_210
(DNA polymerase III (alpha))

Rahel_211
(RF-1 peptide chain release factor)

Rahel_212
(RecA-like DNA recombinase)

Rahel_213
(holliday junction resolvase)

Rahel_214

Rahel_215
(HNH endonuclease)

Rahel_216
(RusA-like resolvase)

Rahel_217

Rahel_218

Rahel_219

Rahel_220

Rahel_221
(glycoside hydrolase)

Rahel_222

Rahel_223

Rahel_224
(HNH endonuclease)

Rahel_227

Rahel_228

Rahel_229

Rahel_230

Rahel_231

Rahel_232

Rahel_233

Rahel_234

Rahel_235
(Ro-like RNA binding protein)

Rahel_236

Rahel_237

Rahel_238

Rahel_239

Rahel_240

Rahel_241

Rahel_242
(galactosaminyltransferase)

Rahel_243

Rahel_244
(glycosyltransferase)

Rahel_245
(galactosyltransferase)

Rahel_246
(nicotinate ribosyltransferase)

Rahel_247
(glycosyltransferase)

Rahel_248

Rahel_249

Rahel_250

Rahel_251

Rahel_252
(lysin A)

Rahel_253
(membrane protein)

Rahel_254
(lysin B)

Rahel_255
(terminase)

Rahel_256

Rahel_257

Rahel_258

Rahel_259

Rahel_260
(polynucleotide kinase)

Rahel_261

Rahel_262

Rahel_263
(serine/threonine kinase)

Rahel_264

Rahel_265

Rahel_266
(adenylosuccinate synthetase)

Rahel_267

Rahel_268

Rahel_269

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359348
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 69
Pitt Freezer Box Grid# C4
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload