Mycobacterium phage EmmaElysia
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Detailed Information for Phage EmmaElysia
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEmma Gubbins and Elysia Wang
Year Found2015
Location FoundNorthampton, MA USA
Finding InstitutionSmith College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates42.316111 N, 72.6375 W Map
Discovery NotesSoil sample taken from depth of 2cm in the ground, in proximity of Ford Hall at Smith College.
Naming NotesThe discoverers' first names combined.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 4, 2016
Sequencing FacilitySmith College
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage216
Genome length (bp)157365
Character of genome endsCircularly Permuted
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesSmall and clear
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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EmmaElysia_1

EmmaElysia_2

EmmaElysia_3
(HNH endonuclease)

EmmaElysia_4

EmmaElysia_5

EmmaElysia_6

EmmaElysia_7

EmmaElysia_8

EmmaElysia_9

EmmaElysia_10

EmmaElysia_11

EmmaElysia_12

EmmaElysia_13

EmmaElysia_14

EmmaElysia_15

EmmaElysia_16

EmmaElysia_17
(histidine triad nucleotide binding protein)

EmmaElysia_18

EmmaElysia_19

EmmaElysia_20

EmmaElysia_21

EmmaElysia_22

EmmaElysia_23

EmmaElysia_24

EmmaElysia_25

EmmaElysia_26

EmmaElysia_27

EmmaElysia_28

EmmaElysia_29
(helix-turn-helix DNA binding protein)

EmmaElysia_30

EmmaElysia_31

EmmaElysia_32

EmmaElysia_33
(ribbon-helix-helix DNA binding domain protein)

EmmaElysia_34

EmmaElysia_35

EmmaElysia_36

EmmaElysia_37

EmmaElysia_38

EmmaElysia_39

EmmaElysia_40

EmmaElysia_41

EmmaElysia_42

EmmaElysia_43

EmmaElysia_44

EmmaElysia_45

EmmaElysia_46

EmmaElysia_47

EmmaElysia_48

EmmaElysia_49

EmmaElysia_50

EmmaElysia_51

EmmaElysia_52

EmmaElysia_53

EmmaElysia_54
(helix-turn-helix DNA binding protein)

EmmaElysia_55

EmmaElysia_56

EmmaElysia_57

EmmaElysia_58

EmmaElysia_59

EmmaElysia_60

EmmaElysia_61
(helix-turn-helix DNA binding domain protein)

EmmaElysia_62
(helix-turn-helix DNA binding domain protein)

EmmaElysia_63

EmmaElysia_64

EmmaElysia_65

EmmaElysia_66

EmmaElysia_67

EmmaElysia_68

EmmaElysia_69

EmmaElysia_70

EmmaElysia_71

EmmaElysia_72

EmmaElysia_73

EmmaElysia_74

EmmaElysia_75

EmmaElysia_76

EmmaElysia_77

EmmaElysia_78

EmmaElysia_79

EmmaElysia_80

EmmaElysia_81

EmmaElysia_82

EmmaElysia_87
(methyltransferase)

EmmaElysia_88

EmmaElysia_89
(portal protein)

EmmaElysia_90

EmmaElysia_91

EmmaElysia_92
(ThyX-like thymidylate synthase)

EmmaElysia_93

EmmaElysia_94
(RNA ligase)

EmmaElysia_95
(HNH endonuclease)

EmmaElysia_96
(LysM domain protein)

EmmaElysia_97

EmmaElysia_98

EmmaElysia_99
(major capsid protein)

EmmaElysia_100
(holliday junction resolvase)

EmmaElysia_101
(capsid decoration protein)

EmmaElysia_102

EmmaElysia_103

EmmaElysia_104

EmmaElysia_105

EmmaElysia_106

EmmaElysia_107

EmmaElysia_108
(membrane protein)

EmmaElysia_109

EmmaElysia_110

EmmaElysia_111

EmmaElysia_112

EmmaElysia_113

EmmaElysia_114

EmmaElysia_115

EmmaElysia_116

EmmaElysia_117

EmmaElysia_118

EmmaElysia_119

EmmaElysia_120

EmmaElysia_121
(N-acetyltransferase)

EmmaElysia_122

EmmaElysia_123

EmmaElysia_124

EmmaElysia_125

EmmaElysia_126

EmmaElysia_127

EmmaElysia_128
(tail sheath protein)

EmmaElysia_129

EmmaElysia_130

EmmaElysia_131
(tail assembly chaperone)

EmmaElysia_132
(tail assembly chaperone)

EmmaElysia_133
(tape measure protein)

EmmaElysia_134
(minor tail protein)

EmmaElysia_135

EmmaElysia_136

EmmaElysia_137
(minor tail protein)

EmmaElysia_138

EmmaElysia_139

EmmaElysia_140
(baseplate wedge protein)

EmmaElysia_141
(baseplate wedge protein)

EmmaElysia_142

EmmaElysia_143

EmmaElysia_144

EmmaElysia_145
(minor tail protein)

EmmaElysia_146
(minor tail protein)

EmmaElysia_147

EmmaElysia_148

EmmaElysia_149

EmmaElysia_150

EmmaElysia_151

EmmaElysia_152

EmmaElysia_153

EmmaElysia_156

EmmaElysia_157
(peptidyl tRNA hydrolase)

EmmaElysia_163

EmmaElysia_165

EmmaElysia_173
(HNH endonuclease)

EmmaElysia_175
(D-ala-D-ala carboxypeptidase)

EmmaElysia_176

EmmaElysia_189

EmmaElysia_190

EmmaElysia_191
(helicase)

EmmaElysia_192

EmmaElysia_193

EmmaElysia_194

EmmaElysia_195

EmmaElysia_196

EmmaElysia_197

EmmaElysia_198

EmmaElysia_199

EmmaElysia_200
(thymidylate kinase)

EmmaElysia_201
(aminotransferase)

EmmaElysia_202
(RNA binding domain protein)

EmmaElysia_203

EmmaElysia_204

EmmaElysia_205
(DnaC-like helicase loader)

EmmaElysia_206
(DnaB-like dsDNA helicase)

EmmaElysia_207

EmmaElysia_208
(DNA primase)

EmmaElysia_209

EmmaElysia_210
(DnaJ-like chaperonin)

EmmaElysia_211
(ssDNA binding domain protein)

EmmaElysia_212
(DNA polymerase III (alpha))

EmmaElysia_213

EmmaElysia_214
(RF-1 peptide chain release factor)

EmmaElysia_215
(RecA-like DNA recombinase)

EmmaElysia_216
(holliday junction resolvase)

EmmaElysia_217

EmmaElysia_218
(HNH endonuclease)

EmmaElysia_219
(RusA-like resolvase)

EmmaElysia_220

EmmaElysia_221

EmmaElysia_222

EmmaElysia_223

EmmaElysia_224
(glycoside hydrolase)

EmmaElysia_225

EmmaElysia_226
(HNH endonuclease)

EmmaElysia_227

EmmaElysia_230

EmmaElysia_231

EmmaElysia_232

EmmaElysia_233

EmmaElysia_234

EmmaElysia_235

EmmaElysia_236

EmmaElysia_237

EmmaElysia_238
(Ro-like RNA binding protein)

EmmaElysia_239

EmmaElysia_240

EmmaElysia_241

EmmaElysia_242

EmmaElysia_243

EmmaElysia_244

EmmaElysia_245
(galactosaminyltransferase)

EmmaElysia_246

EmmaElysia_247
(glycosyltransferase)

EmmaElysia_248
(galactosyltransferase)

EmmaElysia_249
(nicotinate ribosyltransferase)

EmmaElysia_250
(glycosyltransferase)

EmmaElysia_251

EmmaElysia_252

EmmaElysia_253

EmmaElysia_254

EmmaElysia_255
(lysin A)

EmmaElysia_256
(membrane protein)

EmmaElysia_257
(lysin B)

EmmaElysia_258
(terminase)

EmmaElysia_259

EmmaElysia_260

EmmaElysia_261

EmmaElysia_262

EmmaElysia_263
(polynucleotide kinase)

EmmaElysia_264

EmmaElysia_265
(serine/threonine kinase)

EmmaElysia_266

EmmaElysia_267

EmmaElysia_268
(adenylosuccinate synthetase)

EmmaElysia_269

EmmaElysia_270

EmmaElysia_271

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359328
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 23
Pitt Freezer Box Grid# F3
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload