Mycobacterium phage Quasimodo
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Detailed Information for Phage Quasimodo
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDanielle Chew-Martinez
Year Found2019
Location FoundWashington D.C., DC United States of America
Finding InstitutionHoward University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates38.921944 N, 77.017778 W Map
Discovery NotesThe soil was wet, and clayish texture. The color of the soil was dark-brown, grey, and yellow. The depth of the soil when collected was 10 cm. The soil was collected from the entrance of the Quadrangle dormitories by a brick wall with some ivy growing nearby.
Naming NotesThe phage is named after the hunchback of Notre Dame, Quasimodo.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 5, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage327
Genome length (bp)156354
Character of genome endsCircularly Permuted
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Janiyra (C1)

Jaygup (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionHoward University
Annotation StatusIn GenBank
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Quasimodo_1

Quasimodo_2

Quasimodo_3
(nucleotidyltransferase with HNH endonuclease)

Quasimodo_4

Quasimodo_5

Quasimodo_6

Quasimodo_7

Quasimodo_8

Quasimodo_9

Quasimodo_10

Quasimodo_11

Quasimodo_12

Quasimodo_13

Quasimodo_14

Quasimodo_15

Quasimodo_16

Quasimodo_17
(histidine triad nucleotide binding protein)

Quasimodo_18

Quasimodo_19

Quasimodo_20

Quasimodo_21

Quasimodo_22

Quasimodo_23

Quasimodo_24

Quasimodo_25
(HNH endonuclease)

Quasimodo_26

Quasimodo_27

Quasimodo_28

Quasimodo_29
(band-7-like membrane protein)

Quasimodo_30

Quasimodo_31
(helix-turn-helix DNA binding domain protein)

Quasimodo_32

Quasimodo_33

Quasimodo_34

Quasimodo_35
(ribbon-helix-helix DNA binding domain protein)

Quasimodo_36

Quasimodo_37

Quasimodo_38

Quasimodo_39

Quasimodo_40

Quasimodo_41

Quasimodo_42

Quasimodo_43

Quasimodo_44

Quasimodo_45

Quasimodo_46

Quasimodo_47

Quasimodo_48

Quasimodo_49

Quasimodo_50

Quasimodo_51

Quasimodo_52

Quasimodo_53

Quasimodo_54

Quasimodo_55
(helix-turn-helix DNA binding domain protein)

Quasimodo_56

Quasimodo_57

Quasimodo_58

Quasimodo_59

Quasimodo_60

Quasimodo_61

Quasimodo_62
(helix-turn-helix DNA binding domain protein)

Quasimodo_63
(helix-turn-helix DNA binding domain protein)

Quasimodo_64

Quasimodo_65

Quasimodo_66

Quasimodo_67

Quasimodo_68

Quasimodo_69

Quasimodo_70

Quasimodo_71

Quasimodo_72

Quasimodo_73

Quasimodo_74

Quasimodo_75

Quasimodo_76

Quasimodo_77

Quasimodo_78

Quasimodo_79

Quasimodo_80

Quasimodo_81

Quasimodo_82

Quasimodo_83
(ParB-like nuclease domain protein)

Quasimodo_88
(methyltransferase)

Quasimodo_89

Quasimodo_90
(portal protein)

Quasimodo_91

Quasimodo_92

Quasimodo_93
(ThyX-like thymidylate synthase)

Quasimodo_94

Quasimodo_95
(RNA ligase)

Quasimodo_96
(HNH endonuclease)

Quasimodo_97
(LysM-like peptidoglycan binding protein)

Quasimodo_98

Quasimodo_99

Quasimodo_100
(major capsid protein)

Quasimodo_101
(holliday junction resolvase)

Quasimodo_102
(capsid decoration protein)

Quasimodo_103

Quasimodo_104

Quasimodo_105

Quasimodo_106

Quasimodo_107

Quasimodo_108

Quasimodo_109

Quasimodo_110

Quasimodo_111

Quasimodo_112

Quasimodo_113

Quasimodo_114

Quasimodo_115

Quasimodo_116

Quasimodo_117

Quasimodo_118

Quasimodo_119

Quasimodo_120

Quasimodo_121

Quasimodo_122

Quasimodo_123

Quasimodo_124

Quasimodo_125

Quasimodo_126
(ParB-like nuclease domain protein)

Quasimodo_127

Quasimodo_128

Quasimodo_129
(tail sheath protein)

Quasimodo_130

Quasimodo_131

Quasimodo_132
(tail assembly chaperone)

Quasimodo_133
(tail assembly chaperone)

Quasimodo_134
(tape measure protein)

Quasimodo_135

Quasimodo_136

Quasimodo_137

Quasimodo_138
(minor tail protein)

Quasimodo_139

Quasimodo_140

Quasimodo_141
(baseplate wedge protein)

Quasimodo_142
(baseplate wedge protein)

Quasimodo_143

Quasimodo_144

Quasimodo_145

Quasimodo_146
(minor tail protein)

Quasimodo_147
(minor tail protein)

Quasimodo_148
(HNH endonuclease)

Quasimodo_149

Quasimodo_150

Quasimodo_151

Quasimodo_152

Quasimodo_153

Quasimodo_154

Quasimodo_155

Quasimodo_159

Quasimodo_160
(peptidyl tRNA hydrolase)

Quasimodo_167

Quasimodo_175
(HNH endonuclease)

Quasimodo_177
(minor tail protein)

Quasimodo_178

Quasimodo_190

Quasimodo_191
(helicase)

Quasimodo_192

Quasimodo_193

Quasimodo_194

Quasimodo_195

Quasimodo_196

Quasimodo_197

Quasimodo_198

Quasimodo_199

Quasimodo_200
(thymidylate kinase)

Quasimodo_201
(aminotransferase)

Quasimodo_202

Quasimodo_203

Quasimodo_204
(DnaC-like helicase loader)

Quasimodo_205
(DnaB-like dsDNA helicase)

Quasimodo_206

Quasimodo_207
(DNA primase)

Quasimodo_208

Quasimodo_209
(DnaJ-like chaperonin)

Quasimodo_210
(ssDNA binding protein)

Quasimodo_211
(dnaE-like DNA polymerase III)

Quasimodo_212
(RF-1 peptide chain release factor)

Quasimodo_213
(RecA-like DNA recombinase)

Quasimodo_214
(holliday junction resolvase)

Quasimodo_215

Quasimodo_216
(HNH endonuclease)

Quasimodo_217
(RusA-like resolvase)

Quasimodo_218

Quasimodo_219

Quasimodo_220

Quasimodo_221

Quasimodo_222

Quasimodo_223

Quasimodo_224
(HNH endonuclease)

Quasimodo_225

Quasimodo_228

Quasimodo_229

Quasimodo_230

Quasimodo_231

Quasimodo_232

Quasimodo_233

Quasimodo_234

Quasimodo_235

Quasimodo_236
(Ro-like RNA binding protein)

Quasimodo_237

Quasimodo_238

Quasimodo_239

Quasimodo_240

Quasimodo_241

Quasimodo_242

Quasimodo_243
(glycosyltransferase)

Quasimodo_244

Quasimodo_245
(glycosyltransferase)

Quasimodo_246
(galactosyltransferase)

Quasimodo_247
(nicotinate ribosyltransferase)

Quasimodo_248
(glycosyltransferase)

Quasimodo_249
(capsid decoration protein)

Quasimodo_250

Quasimodo_251

Quasimodo_252

Quasimodo_253
(lysin A)

Quasimodo_254
(holin)

Quasimodo_255
(lysin B)

Quasimodo_256
(terminase)

Quasimodo_257

Quasimodo_258

Quasimodo_259

Quasimodo_260

Quasimodo_261
(polynucleotide kinase)

Quasimodo_262

Quasimodo_263
(serine/threonine kinase)

Quasimodo_264
(HNH endonuclease)

Quasimodo_265

Quasimodo_266
(PurA-like adenylosuccinate synthetase)

Quasimodo_267

Quasimodo_268

Quasimodo_269

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT723945
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3.2X10^9pfu/ml
Pitt Freezer Box# 99
Pitt Freezer Box Grid# E2
Available Files
GenBank File for PhameratorDownload