Mycobacterium phage Capablanca
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Detailed Information for Phage Capablanca
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesPhiRho
Found ByRebecca Mold
Year Found2021
Location FoundWest Lafayette, IN USA
Finding InstitutionPurdue University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature18°C
GPS Coordinates40.435312 N, 86.925449 W Map
Discovery NotesThis sample was taken from the flowerbed in front of the Phi Sigma Rho Alpha Chapter sorority house on Purdue's campus. The soil sample was dry and slightly cold to the touch. The soil contained many larger pieces of mulch in addition to finer soil below. The sample was collected approximately 0.5 inch below the surface of the ground. The approximate temperature when the sample was taken was 64 degrees Fahrenheit.

Contributing students in lab: Logan Hamilton and Joseph Hickam and Alicia Zeh.
Naming NotesOriginally named after where it was found, in front of the house for Phi Sigma Rho Sorority Alpha Chapter on the campus of Purdue University. Then renamed after chess champion Raul Capablanca whose last name also evokes a lab coat.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage182
Genome length (bp)157537
Character of genome endsCircularly Permuted
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionPurdue University
Annotation StatusIn GenBank
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Capablanca_1

Capablanca_2

Capablanca_3
(nucleotidyl transferase)

Capablanca_4

Capablanca_5

Capablanca_6

Capablanca_7

Capablanca_8

Capablanca_9

Capablanca_10

Capablanca_11

Capablanca_12

Capablanca_13

Capablanca_14

Capablanca_15

Capablanca_16

Capablanca_17

Capablanca_18

Capablanca_19
(histidine triad nucleotide binding protein)

Capablanca_20

Capablanca_21

Capablanca_22

Capablanca_23

Capablanca_24

Capablanca_25

Capablanca_26

Capablanca_27
(HNH endonuclease)

Capablanca_28

Capablanca_29

Capablanca_30

Capablanca_31
(band-7 like membrane protein)

Capablanca_32

Capablanca_33

Capablanca_34

Capablanca_35

Capablanca_36

Capablanca_37
(ribbon-helix-helix DNA binding domain protein)

Capablanca_38

Capablanca_39

Capablanca_40

Capablanca_41

Capablanca_42

Capablanca_43

Capablanca_44

Capablanca_45

Capablanca_46

Capablanca_47

Capablanca_48

Capablanca_49

Capablanca_50

Capablanca_51

Capablanca_52

Capablanca_53

Capablanca_54

Capablanca_55

Capablanca_56

Capablanca_57
(helix-turn-helix DNA binding domain protein)

Capablanca_58

Capablanca_59

Capablanca_60

Capablanca_61

Capablanca_62

Capablanca_63

Capablanca_64
(helix-turn-helix DNA binding domain protein)

Capablanca_65
(helix-turn-helix DNA binding domain protein)

Capablanca_66

Capablanca_67

Capablanca_68

Capablanca_69

Capablanca_70

Capablanca_71

Capablanca_72

Capablanca_73

Capablanca_74

Capablanca_75

Capablanca_76

Capablanca_77

Capablanca_78

Capablanca_79

Capablanca_80

Capablanca_81

Capablanca_82

Capablanca_83

Capablanca_84

Capablanca_85
(ParB-like nuclease domain protein)

Capablanca_90

Capablanca_91

Capablanca_92
(portal protein)

Capablanca_93

Capablanca_94

Capablanca_95
(ThyX-like thymidylate synthase)

Capablanca_96

Capablanca_97
(RNA ligase)

Capablanca_98
(LysM-like peptidoglycan binding protein)

Capablanca_99

Capablanca_100

Capablanca_101
(major capsid protein)

Capablanca_102
(holliday junction resolvase)

Capablanca_103

Capablanca_104
(head fiber protein)

Capablanca_105

Capablanca_106

Capablanca_107

Capablanca_108

Capablanca_109

Capablanca_110

Capablanca_111

Capablanca_112

Capablanca_113

Capablanca_114

Capablanca_115

Capablanca_116

Capablanca_117

Capablanca_118

Capablanca_119

Capablanca_120

Capablanca_121

Capablanca_122

Capablanca_123
(acetyltransferase)

Capablanca_124

Capablanca_125

Capablanca_126

Capablanca_127
(ParB-like nuclease domain protein)

Capablanca_128

Capablanca_129

Capablanca_130
(tail sheath protein)

Capablanca_131

Capablanca_132

Capablanca_133
(tail assembly chaperone)

Capablanca_134
(tail assembly chaperone)

Capablanca_135
(tape measure protein)

Capablanca_136
(minor tail protein)

Capablanca_137

Capablanca_138

Capablanca_139
(minor tail protein)

Capablanca_140

Capablanca_141
(minor tail protein)

Capablanca_142
(baseplate wedge protein)

Capablanca_143
(baseplate J protein)

Capablanca_144

Capablanca_145

Capablanca_146

Capablanca_147
(minor tail protein)

Capablanca_148
(minor tail protein)

Capablanca_149

Capablanca_150

Capablanca_151

Capablanca_152

Capablanca_153

Capablanca_154

Capablanca_155

Capablanca_156

Capablanca_160

Capablanca_161
(peptidyl tRNA hydrolase)

Capablanca_175
(HNH endonuclease)

Capablanca_177
(minor tail protein)

Capablanca_178

Capablanca_190

Capablanca_191

Capablanca_192
(DNA helicase)

Capablanca_193

Capablanca_194

Capablanca_195

Capablanca_196

Capablanca_197

Capablanca_198

Capablanca_199

Capablanca_200

Capablanca_201

Capablanca_202
(thymidylate kinase)

Capablanca_203
(aminotransferase)

Capablanca_204

Capablanca_205

Capablanca_206

Capablanca_207
(DnaC-like helicase loader)

Capablanca_208
(DnaB-like dsDNA helicase)

Capablanca_209

Capablanca_210
(DNA primase)

Capablanca_211

Capablanca_212
(DnaJ-like chaperonin)

Capablanca_213
(ssDNA binding protein)

Capablanca_214
(DnaE-like DNA polymerase III alpha)

Capablanca_215
(RF-1 peptide chain release factor)

Capablanca_216
(RecA-like DNA recombinase)

Capablanca_217
(holliday junction resolvase)

Capablanca_218

Capablanca_219
(HNH endonuclease)

Capablanca_220
(RusA-like resolvase)

Capablanca_221

Capablanca_222

Capablanca_223

Capablanca_224

Capablanca_225

Capablanca_226

Capablanca_227

Capablanca_230

Capablanca_231

Capablanca_232

Capablanca_233

Capablanca_234

Capablanca_235

Capablanca_236

Capablanca_237

Capablanca_238
(Ro-like RNA binding protein)

Capablanca_239

Capablanca_240

Capablanca_241

Capablanca_242

Capablanca_243

Capablanca_244

Capablanca_245
(glycosyltransferase)

Capablanca_246

Capablanca_247
(glycosyltransferase)

Capablanca_248
(glycosyltransferase)

Capablanca_249
(PnuC-like nicotinamide riboside transporter)

Capablanca_250
(glycosyltransferase)

Capablanca_251

Capablanca_252

Capablanca_253

Capablanca_254

Capablanca_255
(lysin A)

Capablanca_256
(holin)

Capablanca_257
(lysin B)

Capablanca_258
(terminase)

Capablanca_259

Capablanca_260

Capablanca_261

Capablanca_262

Capablanca_263
(polynucleotide kinase)

Capablanca_264

Capablanca_265

Capablanca_266
(serine/threonine kinase)

Capablanca_267

Capablanca_268

Capablanca_269
(PurA-like adenylosuccinate synthetase)

Capablanca_270

Capablanca_271

Capablanca_272

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP021681
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 138
Pitt Freezer Box Grid# C6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload