Mycobacterium phage DrPhinkDaddy
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Detailed Information for Phage DrPhinkDaddy
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByChanning Sesoko
Year Found2016
Location FoundDetroit, MI USA
Finding InstitutionUniversity of Detroit Mercy
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.4141 N, 83.1379 W Map
Discovery NotesDiscovered at the University of Detroit Mercy clock tower on September 5th, underneath a patch of mulch, 6cm deep into the soil. Sample was taken at approximately 19:00 hours, with a temperature of 70 degrees Fahrenheit.
Naming NotesDrPhinkDaddy was named after my professor, Dr. Jonathan Finkel, who had a child during the semester we were in the lab, hence the "Daddy".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 22, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1389
Genome length (bp)156574
Character of genome endsCircularly Permuted
GC Content61.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotation StatusIn GenBank
Plaque NotesSmall pinhole-like plaques with halos around the edges of them.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

Click to View

DrPhinkDaddy_1

DrPhinkDaddy_2

DrPhinkDaddy_3
(nucleotidyltransferase)

DrPhinkDaddy_4

DrPhinkDaddy_5

DrPhinkDaddy_6

DrPhinkDaddy_7

DrPhinkDaddy_8

DrPhinkDaddy_9

DrPhinkDaddy_10

DrPhinkDaddy_11

DrPhinkDaddy_12

DrPhinkDaddy_13

DrPhinkDaddy_14

DrPhinkDaddy_15

DrPhinkDaddy_16

DrPhinkDaddy_17

DrPhinkDaddy_18
(histidine triad nucleotide binding protein)

DrPhinkDaddy_19

DrPhinkDaddy_20

DrPhinkDaddy_21

DrPhinkDaddy_22

DrPhinkDaddy_23

DrPhinkDaddy_24

DrPhinkDaddy_25

DrPhinkDaddy_26

DrPhinkDaddy_27

DrPhinkDaddy_28

DrPhinkDaddy_29

DrPhinkDaddy_30

DrPhinkDaddy_31
(helix-turn-helix DNA binding protein)

DrPhinkDaddy_32

DrPhinkDaddy_33

DrPhinkDaddy_34

DrPhinkDaddy_35
(ribbon-helix-helix DNA binding domain protein)

DrPhinkDaddy_36

DrPhinkDaddy_37

DrPhinkDaddy_38

DrPhinkDaddy_39

DrPhinkDaddy_40

DrPhinkDaddy_41

DrPhinkDaddy_42

DrPhinkDaddy_43

DrPhinkDaddy_44

DrPhinkDaddy_45

DrPhinkDaddy_46

DrPhinkDaddy_47

DrPhinkDaddy_48

DrPhinkDaddy_49

DrPhinkDaddy_50

DrPhinkDaddy_51

DrPhinkDaddy_52

DrPhinkDaddy_53

DrPhinkDaddy_54

DrPhinkDaddy_55
(helix-turn-helix DNA binding protein)

DrPhinkDaddy_56

DrPhinkDaddy_57

DrPhinkDaddy_58

DrPhinkDaddy_59

DrPhinkDaddy_60

DrPhinkDaddy_61

DrPhinkDaddy_62
(helix-turn-helix DNA binding domain protein)

DrPhinkDaddy_63
(helix-turn-helix DNA binding domain protein)

DrPhinkDaddy_64

DrPhinkDaddy_65

DrPhinkDaddy_66

DrPhinkDaddy_67

DrPhinkDaddy_68

DrPhinkDaddy_69

DrPhinkDaddy_70

DrPhinkDaddy_71

DrPhinkDaddy_72

DrPhinkDaddy_73

DrPhinkDaddy_74

DrPhinkDaddy_75

DrPhinkDaddy_76

DrPhinkDaddy_77

DrPhinkDaddy_78

DrPhinkDaddy_79

DrPhinkDaddy_80

DrPhinkDaddy_81

DrPhinkDaddy_82

DrPhinkDaddy_87
(methyltransferase)

DrPhinkDaddy_88

DrPhinkDaddy_89
(portal protein)

DrPhinkDaddy_90

DrPhinkDaddy_91

DrPhinkDaddy_92
(ThyX-like thymidylate synthase)

DrPhinkDaddy_93

DrPhinkDaddy_94
(RNA ligase)

DrPhinkDaddy_95
(LysM-domain protein)

DrPhinkDaddy_96

DrPhinkDaddy_97

DrPhinkDaddy_98
(major capsid protein)

DrPhinkDaddy_99
(holliday junction resolvase)

DrPhinkDaddy_100
(capsid decoration protein)

DrPhinkDaddy_101

DrPhinkDaddy_102

DrPhinkDaddy_103

DrPhinkDaddy_104

DrPhinkDaddy_105

DrPhinkDaddy_106

DrPhinkDaddy_107
(membrane protein)

DrPhinkDaddy_108

DrPhinkDaddy_109

DrPhinkDaddy_110

DrPhinkDaddy_111

DrPhinkDaddy_112

DrPhinkDaddy_113

DrPhinkDaddy_114

DrPhinkDaddy_115

DrPhinkDaddy_116

DrPhinkDaddy_117

DrPhinkDaddy_118

DrPhinkDaddy_119

DrPhinkDaddy_120
(N-acetyltransferase)

DrPhinkDaddy_121

DrPhinkDaddy_122

DrPhinkDaddy_123

DrPhinkDaddy_124

DrPhinkDaddy_125

DrPhinkDaddy_126
(tail sheath protein)

DrPhinkDaddy_127

DrPhinkDaddy_128

DrPhinkDaddy_129
(tail assembly chaperone)

DrPhinkDaddy_130
(tail assembly chaperone)

DrPhinkDaddy_131
(tape measure protein)

DrPhinkDaddy_132
(minor tail protein)

DrPhinkDaddy_133

DrPhinkDaddy_134

DrPhinkDaddy_135
(minor tail protein)

DrPhinkDaddy_136

DrPhinkDaddy_137

DrPhinkDaddy_138
(baseplate wedge protein)

DrPhinkDaddy_139
(baseplate wedge protein)

DrPhinkDaddy_140

DrPhinkDaddy_141

DrPhinkDaddy_142

DrPhinkDaddy_143
(minor tail protein)

DrPhinkDaddy_144
(minor tail protein)

DrPhinkDaddy_145

DrPhinkDaddy_146

DrPhinkDaddy_147

DrPhinkDaddy_148

DrPhinkDaddy_149

DrPhinkDaddy_150

DrPhinkDaddy_151

DrPhinkDaddy_154

DrPhinkDaddy_155
(peptidyl tRNA hydrolase)

DrPhinkDaddy_170
(D-ala-D-ala carboxypeptidase)

DrPhinkDaddy_171

DrPhinkDaddy_183

DrPhinkDaddy_184

DrPhinkDaddy_185
(helicase)

DrPhinkDaddy_186

DrPhinkDaddy_187

DrPhinkDaddy_188

DrPhinkDaddy_189

DrPhinkDaddy_190

DrPhinkDaddy_191

DrPhinkDaddy_192

DrPhinkDaddy_193

DrPhinkDaddy_194

DrPhinkDaddy_195
(thymidylate kinase)

DrPhinkDaddy_196
(aminotransferase)

DrPhinkDaddy_197
(RNA binding domain protein)

DrPhinkDaddy_198

DrPhinkDaddy_199
(DnaC-like helicase loader)

DrPhinkDaddy_200
(DnaB-like dsDNA helicase)

DrPhinkDaddy_201

DrPhinkDaddy_202
(DNA primase)

DrPhinkDaddy_203

DrPhinkDaddy_204
(DnaJ-like chaperonin)

DrPhinkDaddy_205
(ssDNA binding domain protein)

DrPhinkDaddy_206
(DNA polymerase III (alpha))

DrPhinkDaddy_207
(RF-1 peptide chain release factor)

DrPhinkDaddy_208
(RecA-like DNA recombinase)

DrPhinkDaddy_209
(holliday junction resolvase)

DrPhinkDaddy_210

DrPhinkDaddy_211
(HNH endonuclease)

DrPhinkDaddy_212
(RusA-like revolvase)

DrPhinkDaddy_213

DrPhinkDaddy_214

DrPhinkDaddy_215

DrPhinkDaddy_216

DrPhinkDaddy_217
(glycoside hydrolase)

DrPhinkDaddy_218

DrPhinkDaddy_219

DrPhinkDaddy_222

DrPhinkDaddy_223

DrPhinkDaddy_224

DrPhinkDaddy_225

DrPhinkDaddy_226

DrPhinkDaddy_227

DrPhinkDaddy_228

DrPhinkDaddy_229

DrPhinkDaddy_230
(Ro-like RNA binding protein)

DrPhinkDaddy_231

DrPhinkDaddy_232

DrPhinkDaddy_233

DrPhinkDaddy_234

DrPhinkDaddy_235

DrPhinkDaddy_236

DrPhinkDaddy_237
(galactosaminyltransferase)

DrPhinkDaddy_238

DrPhinkDaddy_239
(glycosyltransferase)

DrPhinkDaddy_240
(galactosyltransferase)

DrPhinkDaddy_241
(nicotinate ribosyltransferase)

DrPhinkDaddy_242
(glycosyltransferase)

DrPhinkDaddy_243

DrPhinkDaddy_244

DrPhinkDaddy_245

DrPhinkDaddy_246

DrPhinkDaddy_247
(lysin A)

DrPhinkDaddy_248
(membrane protein)

DrPhinkDaddy_249
(lysin B)

DrPhinkDaddy_250
(terminase)

DrPhinkDaddy_251

DrPhinkDaddy_252

DrPhinkDaddy_253

DrPhinkDaddy_254

DrPhinkDaddy_255
(polynucleotide kinase)

DrPhinkDaddy_256

DrPhinkDaddy_257

DrPhinkDaddy_258
(serine/threonine kinase)

DrPhinkDaddy_259

DrPhinkDaddy_260

DrPhinkDaddy_261
(adenylosuccinate synthetase)

DrPhinkDaddy_262

DrPhinkDaddy_263

DrPhinkDaddy_264

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK450434
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 45
Pitt Freezer Box Grid# A12
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload