Mycobacterium phage SilverDipper
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Detailed Information for Phage SilverDipper
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found BySean Renwick and Julia Mollenhauer
Year Found2019
Location FoundWest Lafayette, IN United States
Finding InstitutionPurdue University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature27°C
GPS Coordinates40.421215 N, 86.903572 W Map
Discovery NotesCollected 11.7 inches from walkway/concrete barrier
Depth from surface of about 2 inches
Outdoor humidity 46%
Naming NotesNamed after local ice cream shop nearby
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 4, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage488
Genome length (bp)155812
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionPurdue University
Annotation StatusIn GenBank
Plaque NotesSmall, slightly blurred edges and clearer in center. Very round.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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SilverDipper_1

SilverDipper_2

SilverDipper_3
(nucleotidyl transferase)

SilverDipper_4

SilverDipper_5

SilverDipper_6

SilverDipper_7

SilverDipper_8

SilverDipper_9

SilverDipper_10

SilverDipper_11

SilverDipper_12

SilverDipper_13

SilverDipper_14

SilverDipper_15

SilverDipper_16

SilverDipper_17

SilverDipper_18
(histidine triad nucleotide binding protein)

SilverDipper_19

SilverDipper_20

SilverDipper_21

SilverDipper_22

SilverDipper_23

SilverDipper_24

SilverDipper_25

SilverDipper_26
(HNH endonuclease)

SilverDipper_27

SilverDipper_28

SilverDipper_29

SilverDipper_30
(band-7-like membrane protein)

SilverDipper_31

SilverDipper_32

SilverDipper_33

SilverDipper_34

SilverDipper_35

SilverDipper_36
(ribbon-helix-helix DNA binding domain protein)

SilverDipper_37

SilverDipper_38

SilverDipper_39

SilverDipper_40

SilverDipper_41

SilverDipper_42

SilverDipper_43

SilverDipper_44

SilverDipper_45

SilverDipper_46

SilverDipper_47

SilverDipper_48

SilverDipper_49

SilverDipper_50

SilverDipper_51

SilverDipper_52

SilverDipper_53

SilverDipper_54

SilverDipper_55

SilverDipper_56

SilverDipper_57

SilverDipper_58

SilverDipper_59

SilverDipper_60

SilverDipper_61

SilverDipper_62

SilverDipper_63
(helix-turn-helix DNA binding domain protein)

SilverDipper_64
(helix-turn-helix DNA binding domain protein)

SilverDipper_65

SilverDipper_66

SilverDipper_67

SilverDipper_68

SilverDipper_69

SilverDipper_70

SilverDipper_71

SilverDipper_72

SilverDipper_73

SilverDipper_74

SilverDipper_75

SilverDipper_76

SilverDipper_77

SilverDipper_78

SilverDipper_79

SilverDipper_80

SilverDipper_81

SilverDipper_82

SilverDipper_83

SilverDipper_84

SilverDipper_89

SilverDipper_90

SilverDipper_91
(portal protein)

SilverDipper_92

SilverDipper_93

SilverDipper_94
(ThyX-like thymidylate synthase)

SilverDipper_95

SilverDipper_96
(RNA ligase)

SilverDipper_97
(HNH endonuclease)

SilverDipper_98

SilverDipper_99

SilverDipper_100

SilverDipper_101
(major capsid protein)

SilverDipper_102

SilverDipper_103

SilverDipper_104

SilverDipper_105

SilverDipper_106

SilverDipper_107

SilverDipper_108

SilverDipper_109

SilverDipper_110

SilverDipper_111

SilverDipper_112

SilverDipper_113

SilverDipper_114

SilverDipper_115

SilverDipper_116

SilverDipper_117

SilverDipper_118

SilverDipper_119

SilverDipper_120

SilverDipper_121

SilverDipper_122
(acetyltransferase)

SilverDipper_123

SilverDipper_124

SilverDipper_125

SilverDipper_126
(ParB-like nuclease domain protein)

SilverDipper_127

SilverDipper_128

SilverDipper_129
(tail sheath protein)

SilverDipper_130

SilverDipper_131

SilverDipper_132
(tail assembly chaperone)

SilverDipper_133
(tail assembly chaperone)

SilverDipper_134
(tape measure protein)

SilverDipper_135
(minor tail protein)

SilverDipper_136

SilverDipper_137

SilverDipper_138
(minor tail protein)

SilverDipper_139

SilverDipper_140

SilverDipper_141
(baseplate wedge protein)

SilverDipper_142
(baseplate wedge protein)

SilverDipper_143

SilverDipper_144

SilverDipper_145

SilverDipper_146
(minor tail protein)

SilverDipper_147
(minor tail protein)

SilverDipper_148

SilverDipper_149

SilverDipper_150

SilverDipper_151

SilverDipper_152

SilverDipper_153

SilverDipper_154

SilverDipper_155

SilverDipper_159

SilverDipper_160
(peptidyl tRNA hydrolase)

SilverDipper_174
(HNH endonuclease)

SilverDipper_176
(minor tail protein)

SilverDipper_177

SilverDipper_189

SilverDipper_190

SilverDipper_191
(DNA helicase)

SilverDipper_192

SilverDipper_193

SilverDipper_194

SilverDipper_195

SilverDipper_196

SilverDipper_197

SilverDipper_198

SilverDipper_199

SilverDipper_200

SilverDipper_201
(thymidylate kinase)

SilverDipper_202
(aminotransferase)

SilverDipper_203
(RNA binding protein)

SilverDipper_204

SilverDipper_205

SilverDipper_206
(DnaC-like helicase loader)

SilverDipper_207
(DnaB-like dsDNA helicase)

SilverDipper_208

SilverDipper_209
(DNA primase)

SilverDipper_210

SilverDipper_211
(DnaJ-like chaperonin)

SilverDipper_212
(ssDNA binding protein)

SilverDipper_213
(dnaE-like DNA polymerase III)

SilverDipper_214
(RF-1 peptide chain release factor)

SilverDipper_215
(RecA-like DNA recombinase)

SilverDipper_216
(holliday junction resolvase)

SilverDipper_217

SilverDipper_218
(HNH endonuclease)

SilverDipper_219
(RusA-like resolvase)

SilverDipper_220

SilverDipper_221

SilverDipper_222

SilverDipper_223

SilverDipper_224
(glycoside hydrolase)

SilverDipper_225

SilverDipper_226

SilverDipper_229

SilverDipper_230

SilverDipper_231

SilverDipper_232

SilverDipper_233

SilverDipper_234

SilverDipper_235

SilverDipper_236

SilverDipper_237
(Ro-like RNA binding protein)

SilverDipper_238

SilverDipper_239

SilverDipper_240

SilverDipper_241

SilverDipper_242

SilverDipper_243

SilverDipper_244

SilverDipper_245
(glycosyltransferase)

SilverDipper_246

SilverDipper_247
(glycosyltransferase)

SilverDipper_248
(glycosyltransferase)

SilverDipper_249
(PnuC-like nicotinamide riboside transporter)

SilverDipper_250
(glycosyltransferase)

SilverDipper_251

SilverDipper_252

SilverDipper_253

SilverDipper_254

SilverDipper_255
(lysin A)

SilverDipper_256
(holin)

SilverDipper_257
(lysin B)

SilverDipper_258
(terminase)

SilverDipper_259

SilverDipper_260

SilverDipper_261

SilverDipper_262

SilverDipper_263
(polynucleotide kinase)

SilverDipper_264

SilverDipper_265
(serine/threonine kinase)

SilverDipper_266

SilverDipper_267

SilverDipper_268
(PurA-like adenylosuccinate synthetase)

SilverDipper_269

SilverDipper_270

SilverDipper_271

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ681511
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 108
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload