Mycobacterium phage Amataga
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Detailed Information for Phage Amataga
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesCezar
Found ByPaige Faasuamalie
Year Found2017
Location FoundEaston, PA United States of America
Finding InstitutionLafayette College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.697085 N, 75.210983 W Map
Discovery NotesDiscovered under hedge in moist soil by Ramer History House on Lafayette College Campus
Naming NotesI observed two morphologies, a big and a small, on my initial plate. I decided to use the bigger plaque for further research and named it after my German Shepherd, Cezar.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 14, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage159
Genome length (bp)154553
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

Linnaeus (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

MoBama (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

SuperCallie (None)

TinyC (None)

Trilla23 (None)

Turret (None)

RetimsGems (A1)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Donegal (C1)

Doodle1 (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HarrySpotter (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Jessibeth14 (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Lionheart (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

MrsHay (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

OaklaforG (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

SandySandal (C1)

Sauce (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Feauphix (C2)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Annotation StatusIn GenBank
Plaque NotesPlaques were medium size, about the size of the tip of a pen; plaques were round and clear
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Amataga_1

Amataga_2

Amataga_3
(HNH endonuclease)

Amataga_4

Amataga_5

Amataga_6

Amataga_7

Amataga_8

Amataga_9

Amataga_10

Amataga_11

Amataga_12

Amataga_13

Amataga_14

Amataga_15

Amataga_16

Amataga_17
(histidine triad nucleotide binding protein)

Amataga_18

Amataga_19

Amataga_20

Amataga_21

Amataga_22

Amataga_23

Amataga_24

Amataga_25

Amataga_26

Amataga_27

Amataga_28

Amataga_29

Amataga_30

Amataga_31
(helix-turn-helix DNA binding protein)

Amataga_32

Amataga_33

Amataga_34

Amataga_35
(ribbon-helix-helix DNA binding domain)

Amataga_36

Amataga_37

Amataga_38

Amataga_39

Amataga_40

Amataga_41

Amataga_42

Amataga_43

Amataga_44

Amataga_45

Amataga_46

Amataga_47

Amataga_48

Amataga_49

Amataga_50

Amataga_51

Amataga_52

Amataga_53

Amataga_54

Amataga_55
(helix-turn-helix DNA binding protein)

Amataga_56

Amataga_57

Amataga_58

Amataga_59

Amataga_60

Amataga_61

Amataga_62
(helix-turn-helix DNA binding domain)

Amataga_63
(helix-turn-helix DNA binding domain)

Amataga_64

Amataga_65

Amataga_66

Amataga_67

Amataga_68

Amataga_69

Amataga_70

Amataga_71

Amataga_72

Amataga_73

Amataga_74

Amataga_75

Amataga_76

Amataga_77

Amataga_78

Amataga_79

Amataga_80

Amataga_81

Amataga_82

Amataga_83

Amataga_88
(methyltransferase)

Amataga_89

Amataga_90
(portal protein)

Amataga_91

Amataga_92

Amataga_93
(ThyX-like thymidylate synthase)

Amataga_94

Amataga_95
(RNA ligase)

Amataga_96
(HNH endonuclease)

Amataga_97
(LysM-domain)

Amataga_98

Amataga_99

Amataga_100
(major capsid protein)

Amataga_101
(capsid decoration protein)

Amataga_102

Amataga_103

Amataga_104

Amataga_105

Amataga_106

Amataga_107

Amataga_108
(membrane protein)

Amataga_109

Amataga_110

Amataga_111

Amataga_112

Amataga_113

Amataga_114

Amataga_115

Amataga_116

Amataga_117

Amataga_118

Amataga_119

Amataga_120

Amataga_121
(N-acetyltransferase)

Amataga_122

Amataga_123

Amataga_124

Amataga_125

Amataga_126

Amataga_127

Amataga_128
(tail sheath protein)

Amataga_129

Amataga_130

Amataga_131
(tail assembly chaperone)

Amataga_132
(tail assembly chaperone)

Amataga_133
(tape measure protein)

Amataga_134
(minor tail protein)

Amataga_135

Amataga_136

Amataga_137
(minor tail protein)

Amataga_138

Amataga_139

Amataga_140
(baseplate wedge protein)

Amataga_141
(baseplate wedge protein)

Amataga_142

Amataga_143

Amataga_144

Amataga_145
(minor tail protein)

Amataga_146
(minor tail protein)

Amataga_147

Amataga_148

Amataga_149

Amataga_150

Amataga_151

Amataga_152

Amataga_153

Amataga_157

Amataga_158
(peptidyl tRNA hydrolase)

Amataga_172
(HNH endonuclease)

Amataga_174
(minor tail protein, D-ala-D-ala carboxypeptidase)

Amataga_175

Amataga_187

Amataga_188
(helicase)

Amataga_189

Amataga_190

Amataga_191

Amataga_192

Amataga_193

Amataga_194

Amataga_195

Amataga_196

Amataga_197

Amataga_198
(thymidylate kinase)

Amataga_199
(aminotransferase)

Amataga_200
(RNA binding domain)

Amataga_201

Amataga_202

Amataga_203
(DnaC-like helicase loader)

Amataga_204
(DnaB-like dsDNA helicase)

Amataga_205

Amataga_206
(DNA primase)

Amataga_207

Amataga_208
(chaperonin DnaJ-like)

Amataga_209
(ssDNA binding domain)

Amataga_210
(DNA polymerase III (alpha))

Amataga_211
(RF-1 peptide chain release factor)

Amataga_212
(RecA-like DNA recombinase)

Amataga_213
(Holliday junction revolvase)

Amataga_214

Amataga_215
(HNH endonuclease)

Amataga_216
(RusA-like resolvase)

Amataga_217

Amataga_218

Amataga_219

Amataga_220

Amataga_221
(glycoside hydrolase)

Amataga_222

Amataga_223

Amataga_226

Amataga_227

Amataga_228

Amataga_229

Amataga_230

Amataga_231

Amataga_232

Amataga_233

Amataga_234
(Ro-like RNA binding protein)

Amataga_235

Amataga_236

Amataga_237

Amataga_238

Amataga_239

Amataga_240

Amataga_241
(galactosaminyltransferase)

Amataga_242

Amataga_243
(glycosyltransferase)

Amataga_244
(galactosyltransferase)

Amataga_245
(nicotinate ribosyltransferase)

Amataga_246
(glycosyltransferase)

Amataga_247

Amataga_248

Amataga_249

Amataga_250

Amataga_251
(lysin A)

Amataga_252
(membrane protein)

Amataga_253
(lysin B)

Amataga_254
(terminase)

Amataga_255

Amataga_256

Amataga_257

Amataga_258

Amataga_259
(polynucleotide kinase)

Amataga_260

Amataga_261
(serine/threonine kinase)

Amataga_262

Amataga_263

Amataga_264
(adenylosuccinate synthetase)

Amataga_265

Amataga_266

Amataga_267

Amataga_268

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359338
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 67
Pitt Freezer Box Grid# H4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload