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Dre3 (CT) Misfit (E) Indigenous (BI1) Bexan (A1) Danforth (A8)
Mycobacterium phage EmToTheThree
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Detailed Information for Phage EmToTheThree
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMarissa Creech
Year Found2011
Location FoundLawrenceville, GA USA
Finding InstitutionGeorgia Gwinnett College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.959611 N, 83.975289 W Map
Discovery NotesFound in red clay, on the surface under a wooden block, found August 30, hot and humid, found around 8pm
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 6, 2012
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage34
Sanger Finishing Reactions4
Genome length (bp)155601
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

Click to View

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionFranklin Pierce University
Annotation StatusIn GenBank
Plaque Notes.5mm, very clear, used to be about .1mm but grew throughout generations. We stopped on generation 6
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

Click to View

EmToTheThree_1

EmToTheThree_2

EmToTheThree_3
(HNH endonuclease)

EmToTheThree_4

EmToTheThree_5

EmToTheThree_6

EmToTheThree_7

EmToTheThree_8

EmToTheThree_9

EmToTheThree_10

EmToTheThree_11

EmToTheThree_12

EmToTheThree_13

EmToTheThree_14

EmToTheThree_15

EmToTheThree_16

EmToTheThree_17

EmToTheThree_18

EmToTheThree_19

EmToTheThree_20

EmToTheThree_21
(histidine triad nucleotide binding protein)

EmToTheThree_22

EmToTheThree_23

EmToTheThree_24

EmToTheThree_25

EmToTheThree_26

EmToTheThree_27

EmToTheThree_28

EmToTheThree_29

EmToTheThree_30

EmToTheThree_31

EmToTheThree_32

EmToTheThree_33

EmToTheThree_34
(helix-turn-helix DNA binding protein)

EmToTheThree_35

EmToTheThree_36

EmToTheThree_37

EmToTheThree_38
(ribbon-helix-turn-helix DNA binding domain protein)

EmToTheThree_39

EmToTheThree_40

EmToTheThree_41

EmToTheThree_42

EmToTheThree_43

EmToTheThree_44

EmToTheThree_45

EmToTheThree_46

EmToTheThree_47

EmToTheThree_48

EmToTheThree_49

EmToTheThree_50

EmToTheThree_51

EmToTheThree_52

EmToTheThree_53

EmToTheThree_54

EmToTheThree_55

EmToTheThree_56

EmToTheThree_57

EmToTheThree_58

EmToTheThree_59
(helix-turn-helix DNA binding protein)

EmToTheThree_60

EmToTheThree_61

EmToTheThree_62

EmToTheThree_63

EmToTheThree_64

EmToTheThree_65

EmToTheThree_66
(helix-turn-helix DNA binding domain protein)

EmToTheThree_67
(helix-turn-helix DNA binding domain protein)

EmToTheThree_68

EmToTheThree_69

EmToTheThree_70

EmToTheThree_71

EmToTheThree_72

EmToTheThree_73

EmToTheThree_74

EmToTheThree_75

EmToTheThree_76

EmToTheThree_77

EmToTheThree_78

EmToTheThree_79

EmToTheThree_80

EmToTheThree_81

EmToTheThree_82

EmToTheThree_83

EmToTheThree_84

EmToTheThree_85

EmToTheThree_86

EmToTheThree_91
(methyltransferase)

EmToTheThree_92

EmToTheThree_93
(portal protein)

EmToTheThree_94

EmToTheThree_95

EmToTheThree_96
(ThyX-like thymidylate synthase)

EmToTheThree_97

EmToTheThree_98
(RNA ligase)

EmToTheThree_99
(LysM domain protein)

EmToTheThree_100

EmToTheThree_101

EmToTheThree_102
(major capsid protein)

EmToTheThree_103
(holliday junction resolvase)

EmToTheThree_104
(capsid decoration protein)

EmToTheThree_105

EmToTheThree_106

EmToTheThree_107

EmToTheThree_108

EmToTheThree_109

EmToTheThree_110
(membrane protein)

EmToTheThree_111

EmToTheThree_112

EmToTheThree_113

EmToTheThree_114

EmToTheThree_115

EmToTheThree_116

EmToTheThree_117

EmToTheThree_118

EmToTheThree_119

EmToTheThree_120

EmToTheThree_121

EmToTheThree_122

EmToTheThree_123
(N-acetyltransferase)

EmToTheThree_124

EmToTheThree_125

EmToTheThree_126

EmToTheThree_127

EmToTheThree_128

EmToTheThree_129
(tail sheath protein)

EmToTheThree_130

EmToTheThree_131

EmToTheThree_132
(tail assembly chaperone)

EmToTheThree_133
(tail assembly chaperone)

EmToTheThree_134
(tape measure protein)

EmToTheThree_135
(minor tail protein)

EmToTheThree_136

EmToTheThree_137

EmToTheThree_138
(minor tail protein)

EmToTheThree_139

EmToTheThree_140

EmToTheThree_141
(baseplate wedge protein)

EmToTheThree_142
(baseplate wedge protein)

EmToTheThree_143

EmToTheThree_144

EmToTheThree_145

EmToTheThree_146
(minor tail protein)

EmToTheThree_147
(minor tail protein)

EmToTheThree_148

EmToTheThree_149

EmToTheThree_150

EmToTheThree_151

EmToTheThree_152

EmToTheThree_153

EmToTheThree_154

EmToTheThree_158

EmToTheThree_159
(peptidyl tRNA hydrolase)

EmToTheThree_173
(HNH endonuclease)

EmToTheThree_175
(D-ala-D-ala carboxypeptidase)

EmToTheThree_176

EmToTheThree_188

EmToTheThree_189
(helicase)

EmToTheThree_190

EmToTheThree_191

EmToTheThree_192

EmToTheThree_193

EmToTheThree_194

EmToTheThree_195

EmToTheThree_196

EmToTheThree_197

EmToTheThree_198
(thymidylate kinase)

EmToTheThree_199
(aminotransferase)

EmToTheThree_200
(RNA binding domain protein)

EmToTheThree_201

EmToTheThree_202
(DnaC-like helicase loader)

EmToTheThree_203
(DnaB-like dsDNA helicase)

EmToTheThree_204

EmToTheThree_205
(DNA primase)

EmToTheThree_206

EmToTheThree_207
(DnaJ-like chaperonin)

EmToTheThree_208
(ssDNA binding domain protein)

EmToTheThree_209
(DNA polymerase III (alpha))

EmToTheThree_210
(RF-1 peptide chain release factor)

EmToTheThree_211
(RecA-like DNA recombinase)

EmToTheThree_212
(holliday junction resolvase)

EmToTheThree_213

EmToTheThree_214
(HNH endonuclease)

EmToTheThree_215
(RusA-like resolvase)

EmToTheThree_216

EmToTheThree_217

EmToTheThree_218

EmToTheThree_219

EmToTheThree_220
(glycoside hydrolase)

EmToTheThree_221

EmToTheThree_222

EmToTheThree_225

EmToTheThree_226

EmToTheThree_227

EmToTheThree_228

EmToTheThree_229

EmToTheThree_230

EmToTheThree_231

EmToTheThree_232

EmToTheThree_233
(Ro-like RNA binding protein)

EmToTheThree_234

EmToTheThree_235

EmToTheThree_236

EmToTheThree_237

EmToTheThree_238

EmToTheThree_239

EmToTheThree_240
(galactosaminyltransferase)

EmToTheThree_241

EmToTheThree_242
(glycosyltransferase)

EmToTheThree_243
(galactosyltransferase)

EmToTheThree_244
(nicotinate ribosyltransferase)

EmToTheThree_245
(glycosyltransferase)

EmToTheThree_246

EmToTheThree_247

EmToTheThree_248

EmToTheThree_249

EmToTheThree_250
(HNH endonuclease)

EmToTheThree_251
(lysin A)

EmToTheThree_252
(membrane protein)

EmToTheThree_253
(lysin B)

EmToTheThree_254
(terminase)

EmToTheThree_255

EmToTheThree_256

EmToTheThree_257

EmToTheThree_258

EmToTheThree_259
(polynucleotide kinase)

EmToTheThree_260

EmToTheThree_261

EmToTheThree_262
(serine/threonine kinase)

EmToTheThree_263

EmToTheThree_264

EmToTheThree_265
(adenylosuccinate synthetase)

EmToTheThree_266

EmToTheThree_267

EmToTheThree_268

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359327
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator 2011GAGWemtothethreeMBCW
Pitt Freezer Box# 23
Pitt Freezer Box Grid# 4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload