Mycobacterium phage Shnickers
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Detailed Information for Phage Shnickers
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLetrice Samuels and James Hoffman
Year Found2016
Location FoundBridgePort, CT USA
Finding InstitutionOld Dominion University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.205851 N, 73.207719 W Map
Discovery NotesBackyard at 64 Wentworth in Bridgeport CT. loose, dark soil with pieces of twigs near garden. Air temperature approx 82 F. Depth 13 cm. Soil sample collected by Letrice Samuels. Phage discovered and isolated by Letrice Samuels and James Hoffman.
Naming NotesNames using the first initial of Letrice Samuels' and James Hoffman's last names.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2017
Genome length (bp)154529
Character of genome endsUnknown
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BackyardAgain (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Janiyra (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Shnickers_1

Shnickers_2

Shnickers_3
(nucleotidyltransferase)

Shnickers_4

Shnickers_5

Shnickers_6

Shnickers_7

Shnickers_8

Shnickers_9

Shnickers_10

Shnickers_11

Shnickers_12

Shnickers_13

Shnickers_14

Shnickers_15

Shnickers_16

Shnickers_17
(histidine triad nucleotide binding protein)

Shnickers_18

Shnickers_19

Shnickers_20

Shnickers_21

Shnickers_22

Shnickers_23

Shnickers_24

Shnickers_25

Shnickers_26

Shnickers_27

Shnickers_28

Shnickers_29

Shnickers_30

Shnickers_31
(helix-turn-helix DNA binding protein)

Shnickers_32

Shnickers_33

Shnickers_34

Shnickers_35
(ribbon-helix-helix DNA binding domain protein)

Shnickers_36

Shnickers_37

Shnickers_38

Shnickers_39

Shnickers_40

Shnickers_41

Shnickers_42

Shnickers_43

Shnickers_44

Shnickers_45

Shnickers_46

Shnickers_47

Shnickers_48

Shnickers_49

Shnickers_50

Shnickers_51

Shnickers_52

Shnickers_53

Shnickers_54

Shnickers_55
(helix-turn-helix DNA binding protein)

Shnickers_56

Shnickers_57

Shnickers_58

Shnickers_59

Shnickers_60

Shnickers_61

Shnickers_62
(helix-turn-helix DNA binding domain protein)

Shnickers_63
(helix-turn-helix DNA binding domain protein)

Shnickers_64

Shnickers_65

Shnickers_66

Shnickers_67

Shnickers_68

Shnickers_69

Shnickers_70

Shnickers_71

Shnickers_72

Shnickers_73

Shnickers_74

Shnickers_75

Shnickers_76

Shnickers_77

Shnickers_78

Shnickers_79

Shnickers_80

Shnickers_81

Shnickers_82

Shnickers_83

Shnickers_88
(methyltransferase)

Shnickers_89

Shnickers_90
(portal protein)

Shnickers_91

Shnickers_92

Shnickers_93
(ThyX-like thymidylate synthase)

Shnickers_94

Shnickers_95
(RNA ligase)

Shnickers_96

Shnickers_97
(LysM domain protein)

Shnickers_98

Shnickers_99

Shnickers_100
(major capsid protein)

Shnickers_101
(capsid decoration protein)

Shnickers_102

Shnickers_103

Shnickers_104

Shnickers_105

Shnickers_106

Shnickers_107

Shnickers_108
(membrane protein)

Shnickers_109

Shnickers_110

Shnickers_111

Shnickers_112

Shnickers_113

Shnickers_114

Shnickers_115

Shnickers_116

Shnickers_117

Shnickers_118

Shnickers_119

Shnickers_120

Shnickers_121
(N-acetyltransferase)

Shnickers_122

Shnickers_123

Shnickers_124

Shnickers_125

Shnickers_126

Shnickers_127
(tail sheath protein)

Shnickers_128

Shnickers_129

Shnickers_130
(tail assembly chaperone)

Shnickers_131
(tail assembly chaperone)

Shnickers_132
(tape measure protein)

Shnickers_133
(minor tail protein)

Shnickers_134

Shnickers_135

Shnickers_136
(minor tail protein)

Shnickers_137

Shnickers_138

Shnickers_139
(baseplate wedge protein)

Shnickers_140
(baseplate wedge protein)

Shnickers_141

Shnickers_142

Shnickers_143

Shnickers_144
(minor tail protein)

Shnickers_145
(minor tail protein)

Shnickers_146

Shnickers_147

Shnickers_148

Shnickers_149

Shnickers_150

Shnickers_151

Shnickers_152

Shnickers_156

Shnickers_157
(peptidyl tRNA hydrolase)

Shnickers_172
(D-ala-D-ala carboxypeptidase)

Shnickers_173

Shnickers_185

Shnickers_186
(helicase)

Shnickers_187

Shnickers_188

Shnickers_189

Shnickers_190

Shnickers_191

Shnickers_192

Shnickers_193

Shnickers_194

Shnickers_195
(thymidylate kinase)

Shnickers_196
(aminotransferase)

Shnickers_197
(RNA binding domain protein)

Shnickers_198

Shnickers_199

Shnickers_200
(DnaC-like helicase loader)

Shnickers_201
(DnaB-like dsDNA helicase)

Shnickers_202

Shnickers_203
(DNA primase)

Shnickers_204

Shnickers_205
(DnaJ-like chaperonin)

Shnickers_206
(ssDNA binding domain protein)

Shnickers_207
(DNA polymerase III (alpha))

Shnickers_208
(Rf-1 peptide chain release factor)

Shnickers_209
(RecA-like DNA recombinase)

Shnickers_210
(holliday junction resolvase)

Shnickers_211

Shnickers_212
(HNH endonuclease)

Shnickers_213
(RusA-like resolvase)

Shnickers_214

Shnickers_215

Shnickers_216

Shnickers_217

Shnickers_218
(glycoside hydrolase)

Shnickers_219

Shnickers_220
(HNH endonuclease)

Shnickers_221

Shnickers_224

Shnickers_225

Shnickers_226

Shnickers_227

Shnickers_228

Shnickers_229

Shnickers_230

Shnickers_231

Shnickers_232
(Ro-like RNA binding protein)

Shnickers_233

Shnickers_234

Shnickers_235

Shnickers_236

Shnickers_237

Shnickers_238

Shnickers_239
(galactosaminyltransferase)

Shnickers_240

Shnickers_241
(glycosyltransferase)

Shnickers_242
(galactosyltransferase)

Shnickers_243
(nicotinate ribosyltransferase)

Shnickers_244
(glycosyltransferase)

Shnickers_245

Shnickers_246

Shnickers_247

Shnickers_248

Shnickers_249
(lysin A)

Shnickers_250
(membrane protein)

Shnickers_251
(lysin B)

Shnickers_252
(terminase)

Shnickers_253

Shnickers_254

Shnickers_255

Shnickers_256

Shnickers_257
(polynucleotide kinase)

Shnickers_258

Shnickers_259

Shnickers_260
(serine/threonine kinase)

Shnickers_261

Shnickers_262

Shnickers_263
(adenylosuccinate synthetase)

Shnickers_264

Shnickers_265

Shnickers_266

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359303
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 39
Pitt Freezer Box Grid# C7
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload