Mycobacterium phage Domi
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Detailed Information for Phage Domi
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByElizabeth Yen, Kissaou Tchedre
Year Found2024
Location FoundKyle, TX United States
Finding InstitutionAustin Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates29.98429 N, 97.75838 W Map
Discovery NotesThe sample is from my colleague's garden on the front porch in Kyle, Texas.
Naming NotesWhen I saw the photos for the first time, the phages looked like a droplet to me and so I decided to translate the word 'droplet' into Latin. So 'droplet' means 'domi' in Latin.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 16, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage2769
Genome length (bp)156160
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

Click to View

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionAustin Community College
Annotation StatusBeing Annotated (Expected completion by 1/16/2025)
Plaque NotesTransparent, slightly cloudy, round, ~1 inch in diameter.
MorphotypeSiphoviridae
Number of Genes228
Number of tRNAs32
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Domi_1

Domi_2

Domi_3

Domi_4

Domi_5

Domi_6

Domi_7

Domi_8

Domi_9

Domi_10

Domi_11

Domi_12

Domi_13

Domi_14

Domi_15

Domi_16

Domi_17

Domi_18

Domi_19

Domi_20

Domi_21

Domi_22

Domi_23

Domi_24

Domi_25

Domi_26

Domi_27

Domi_28

Domi_29

Domi_30

Domi_31

Domi_32

Domi_33

Domi_34

Domi_35

Domi_36

Domi_37

Domi_38

Domi_39

Domi_40

Domi_41

Domi_42

Domi_43

Domi_44

Domi_45

Domi_46

Domi_47

Domi_48

Domi_49

Domi_50

Domi_51

Domi_52

Domi_53

Domi_54

Domi_55

Domi_56

Domi_57

Domi_58

Domi_59

Domi_60

Domi_61

Domi_62

Domi_63

Domi_64

Domi_65

Domi_66

Domi_67

Domi_68

Domi_69

Domi_70

Domi_71

Domi_72

Domi_73

Domi_74

Domi_75

Domi_76

Domi_77

Domi_78 — tRNA
(gp78)

Domi_79 — tRNA
(gp79)

Domi_80 — tRNA
(gp80)

Domi_81 — tRNA
(gp81)

Domi_82

Domi_83

Domi_84

Domi_85

Domi_86

Domi_87

Domi_88

Domi_89

Domi_90

Domi_91

Domi_92

Domi_93

Domi_94

Domi_95

Domi_96

Domi_97

Domi_98

Domi_99

Domi_100

Domi_101

Domi_102

Domi_103

Domi_104

Domi_105

Domi_106

Domi_107

Domi_108

Domi_109

Domi_110

Domi_111

Domi_112

Domi_113

Domi_114

Domi_115

Domi_116

Domi_117

Domi_118

Domi_119

Domi_120

Domi_121

Domi_122

Domi_123

Domi_124

Domi_125

Domi_126

Domi_127

Domi_128

Domi_129

Domi_130

Domi_131

Domi_132

Domi_133

Domi_134

Domi_135

Domi_136

Domi_137

Domi_138

Domi_139

Domi_140

Domi_141

Domi_142

Domi_143

Domi_144

Domi_145

Domi_146 — tRNA
(gp146)

Domi_147 — tRNA
(gp147)

Domi_148 — tRNA
(gp148)

Domi_149

Domi_150

Domi_151 — tRNA
(gp151)

Domi_152 — tRNA
(gp152)

Domi_153 — tRNA
(gp153)

Domi_154 — tRNA
(gp154)

Domi_155 — tRNA
(gp155)

Domi_156

Domi_157 — tRNA
(gp157)

Domi_158

Domi_159 — tRNA
(gp159)

Domi_160 — tRNA
(gp160)

Domi_161 — tRNA
(gp161)

Domi_162 — tRNA
(gp162)

Domi_163 — tRNA
(gp163)

Domi_164 — tRNA
(gp164)

Domi_165 — tRNA
(gp165)

Domi_166

Domi_167 — tRNA
(gp167)

Domi_168

Domi_169

Domi_170

Domi_171 — tRNA
(gp171)

Domi_172 — tRNA
(gp172)

Domi_173 — tRNA
(gp173)

Domi_174 — tRNA
(gp174)

Domi_175 — tRNA
(gp175)

Domi_176 — tRNA
(gp176)

Domi_177 — tRNA
(gp177)

Domi_178 — tmRNA
(gp178)

Domi_179 — tRNA
(gp179)

Domi_180 — tRNA
(gp180)

Domi_181

Domi_182

Domi_183

Domi_184

Domi_185

Domi_186

Domi_187

Domi_188

Domi_189

Domi_190

Domi_191

Domi_192

Domi_193

Domi_194

Domi_195

Domi_196

Domi_197

Domi_198

Domi_199

Domi_200

Domi_201

Domi_202

Domi_203

Domi_204

Domi_205

Domi_206

Domi_207

Domi_208

Domi_209

Domi_210

Domi_211

Domi_212

Domi_213

Domi_214

Domi_215

Domi_216

Domi_217 — tRNA
(gp217)

Domi_218 — tRNA
(gp218)

Domi_219

Domi_220

Domi_221

Domi_222

Domi_223

Domi_224

Domi_225

Domi_226

Domi_227

Domi_228

Domi_229

Domi_230

Domi_231

Domi_232

Domi_233

Domi_234

Domi_235

Domi_236

Domi_237

Domi_238

Domi_239

Domi_240

Domi_241

Domi_242

Domi_243

Domi_244

Domi_245

Domi_246

Domi_247

Domi_248

Domi_249

Domi_250

Domi_251

Domi_252

Domi_253

Domi_254

Domi_255

Domi_256

Domi_257

Domi_258

Domi_259

Domi_260

Domi_261

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 188
Pitt Freezer Box Grid# G12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload