Mycobacterium phage Pinkcreek
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Detailed Information for Phage Pinkcreek
Discovery Information
Isolation HostMycobacterium smegmatis ATCC 607
Found ByMajesty Mason
Year Found2018
Location FoundNew Orleans, LA USA
Finding InstitutionXavier University of Louisiana
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates29.9619 N, 90.1013 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 19, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage353
Genome length (bp)153184
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

CindyLou (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

I3 (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

Jemmno (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionCollege of Charleston
Annotation StatusQC Complete
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Pinkcreek_1

Pinkcreek_2

Pinkcreek_3
(nucleotidyl transferase)

Pinkcreek_4

Pinkcreek_5

Pinkcreek_6

Pinkcreek_7

Pinkcreek_8

Pinkcreek_9

Pinkcreek_10

Pinkcreek_11

Pinkcreek_12

Pinkcreek_13

Pinkcreek_14

Pinkcreek_15

Pinkcreek_16

Pinkcreek_17

Pinkcreek_18

Pinkcreek_19

Pinkcreek_20

Pinkcreek_21
(membrane protein, Band-7 -like)

Pinkcreek_22

Pinkcreek_23

Pinkcreek_24

Pinkcreek_25

Pinkcreek_26

Pinkcreek_27

Pinkcreek_28

Pinkcreek_29

Pinkcreek_30

Pinkcreek_31

Pinkcreek_32

Pinkcreek_33

Pinkcreek_34

Pinkcreek_35

Pinkcreek_36

Pinkcreek_37
(helix-turn-helix DNA binding domain)

Pinkcreek_38
(immunity repressor)

Pinkcreek_39

Pinkcreek_40

Pinkcreek_41

Pinkcreek_42

Pinkcreek_43

Pinkcreek_44

Pinkcreek_45

Pinkcreek_46

Pinkcreek_47

Pinkcreek_48

Pinkcreek_49

Pinkcreek_50

Pinkcreek_51

Pinkcreek_52

Pinkcreek_53

Pinkcreek_54

Pinkcreek_55
(helix-turn-helix DNA binding domain)

Pinkcreek_56
(helix-turn-helix DNA binding domain)

Pinkcreek_57

Pinkcreek_58

Pinkcreek_59

Pinkcreek_60

Pinkcreek_61

Pinkcreek_62

Pinkcreek_63

Pinkcreek_64

Pinkcreek_65

Pinkcreek_66

Pinkcreek_67

Pinkcreek_68

Pinkcreek_69

Pinkcreek_70

Pinkcreek_71

Pinkcreek_72

Pinkcreek_73
(ParB-like nuclease domain)

Pinkcreek_78

Pinkcreek_79

Pinkcreek_80
(portal protein)

Pinkcreek_81

Pinkcreek_82

Pinkcreek_83
(ThyX-like thymidylate synthase)

Pinkcreek_84

Pinkcreek_85
(RNA ligase)

Pinkcreek_86
(endolysin)

Pinkcreek_87

Pinkcreek_88

Pinkcreek_89
(major capsid protein)

Pinkcreek_90
(Holliday junction resolvase)

Pinkcreek_91

Pinkcreek_92

Pinkcreek_93

Pinkcreek_94

Pinkcreek_95

Pinkcreek_96

Pinkcreek_97

Pinkcreek_98

Pinkcreek_99

Pinkcreek_100

Pinkcreek_101

Pinkcreek_102

Pinkcreek_103

Pinkcreek_104

Pinkcreek_105

Pinkcreek_106

Pinkcreek_107

Pinkcreek_108

Pinkcreek_109

Pinkcreek_110

Pinkcreek_111
(acetyltransferase)

Pinkcreek_112

Pinkcreek_113

Pinkcreek_114

Pinkcreek_115

Pinkcreek_116

Pinkcreek_117
(tail sheath protein)

Pinkcreek_118

Pinkcreek_119

Pinkcreek_120
(tail assembly chaperone)

Pinkcreek_121
(tail assembly chaperone)

Pinkcreek_122
(tape measure protein)

Pinkcreek_123

Pinkcreek_124

Pinkcreek_125

Pinkcreek_126
(minor tail protein)

Pinkcreek_127

Pinkcreek_128

Pinkcreek_129
(baseplate wedge protein)

Pinkcreek_130
(baseplate J protein)

Pinkcreek_131

Pinkcreek_132

Pinkcreek_133

Pinkcreek_134

Pinkcreek_135
(minor tail protein)

Pinkcreek_136

Pinkcreek_137

Pinkcreek_138

Pinkcreek_139

Pinkcreek_140

Pinkcreek_141

Pinkcreek_145

Pinkcreek_146
(peptidyl tRNA hydrolase)

Pinkcreek_155
(minor tail protein, D-ala-D-ala carboxypeptidase)

Pinkcreek_156

Pinkcreek_157

Pinkcreek_170

Pinkcreek_171
(DNA helicase)

Pinkcreek_172

Pinkcreek_173

Pinkcreek_174

Pinkcreek_175

Pinkcreek_176

Pinkcreek_177

Pinkcreek_178

Pinkcreek_179

Pinkcreek_180

Pinkcreek_181
(thymidylate kinase)

Pinkcreek_182
(aminotransferase)

Pinkcreek_183

Pinkcreek_184

Pinkcreek_185
(DnaC-like helicase loader)

Pinkcreek_186
(DNAB-like dsDNA helicase)

Pinkcreek_187

Pinkcreek_188
(DNA primase)

Pinkcreek_189

Pinkcreek_190
(chaperonin, DnaJ-like)

Pinkcreek_191

Pinkcreek_192
(DnaE-like DNA polymerase III (alpha))

Pinkcreek_193
(RF-1 peptide chain release factor)

Pinkcreek_194
(RecA-like DNA Recombinase)

Pinkcreek_195

Pinkcreek_196

Pinkcreek_197
(Cas4 family exonuclease)

Pinkcreek_198
(RusA-like resolvase (endonuclease))

Pinkcreek_199

Pinkcreek_200

Pinkcreek_201

Pinkcreek_202

Pinkcreek_203

Pinkcreek_204

Pinkcreek_205

Pinkcreek_208

Pinkcreek_209

Pinkcreek_210

Pinkcreek_211

Pinkcreek_212

Pinkcreek_213

Pinkcreek_214
(Ro-like RNA binding protein)

Pinkcreek_215

Pinkcreek_216

Pinkcreek_217

Pinkcreek_218

Pinkcreek_219

Pinkcreek_220
(glycosyltransferase)

Pinkcreek_221
(glycosyltransferase)

Pinkcreek_222
(galactosyltransferase)

Pinkcreek_223

Pinkcreek_224
(glycosyltransferase)

Pinkcreek_225

Pinkcreek_226

Pinkcreek_227

Pinkcreek_228

Pinkcreek_229
(lysin A)

Pinkcreek_230

Pinkcreek_231
(lysin B)

Pinkcreek_232
(terminase)

Pinkcreek_233

Pinkcreek_234

Pinkcreek_235

Pinkcreek_236

Pinkcreek_237
(polynucleotide kinase)

Pinkcreek_238

Pinkcreek_239
(serine/threonine kinase)

Pinkcreek_240
(HNH endonuclease)

Pinkcreek_241

Pinkcreek_242
(adenylosuccinate synthetase PurA-like)

Pinkcreek_243

Pinkcreek_244

Pinkcreek_245

Pinkcreek_246

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ958745
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload