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Mycobacterium phage NoodleTree
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Detailed Information for Phage NoodleTree
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLydia Flores, Madeleine Reyes, Michael Leyzerzon
Year Found2016
Location FoundPlano, TX USA
Finding InstitutionCollin College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature37°C
GPS Coordinates33.05 N, 96.68 W Map
Discovery NotesThe phage was found next to a tree that is very close in proximity to a fountain on Collin College's Spring Creek campus. It was found under mulch.
Naming NotesThe name NoodleTree was chosen due to Lydia's appreciation for education. "I come to school to grow my noodle." - Lydia Flores
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 2, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage83
Genome length (bp)151100
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

Annotating InstitutionCollin College
Annotation StatusIn GenBank
Plaque NotesPlaques appeared to be small in size, but plentiful high concentration and lower dilutions. The attached photograph contains a phage with a 10^-2 concentration.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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NoodleTree_1

NoodleTree_2

NoodleTree_3
(nucleotidyltransferase)

NoodleTree_4

NoodleTree_5

NoodleTree_6

NoodleTree_7

NoodleTree_8

NoodleTree_9

NoodleTree_10

NoodleTree_11

NoodleTree_12

NoodleTree_13

NoodleTree_14

NoodleTree_15

NoodleTree_16

NoodleTree_17

NoodleTree_18

NoodleTree_19

NoodleTree_20

NoodleTree_21

NoodleTree_22

NoodleTree_23

NoodleTree_24

NoodleTree_25

NoodleTree_26

NoodleTree_27

NoodleTree_28

NoodleTree_29

NoodleTree_30
(helix-turn-helix DNA binding domain protein)

NoodleTree_31

NoodleTree_32

NoodleTree_33

NoodleTree_34
(ribbon-helix-helix DNA binding domain protein)

NoodleTree_35

NoodleTree_36

NoodleTree_37

NoodleTree_38

NoodleTree_39

NoodleTree_40

NoodleTree_41

NoodleTree_42

NoodleTree_43

NoodleTree_44

NoodleTree_45

NoodleTree_46

NoodleTree_47

NoodleTree_48

NoodleTree_49

NoodleTree_50

NoodleTree_51

NoodleTree_52

NoodleTree_53

NoodleTree_54

NoodleTree_55

NoodleTree_56
(helix-turn-helix DNA binding protein)

NoodleTree_57

NoodleTree_58

NoodleTree_59

NoodleTree_60

NoodleTree_61

NoodleTree_62

NoodleTree_63
(helix-turn-helix DNA binding protein)

NoodleTree_64
(helix-turn-helix DNA binding protein)

NoodleTree_65

NoodleTree_66

NoodleTree_67

NoodleTree_68

NoodleTree_69

NoodleTree_70

NoodleTree_71

NoodleTree_72

NoodleTree_73

NoodleTree_74

NoodleTree_75

NoodleTree_76

NoodleTree_77

NoodleTree_78

NoodleTree_79

NoodleTree_80

NoodleTree_81

NoodleTree_82

NoodleTree_83

NoodleTree_84

NoodleTree_85

NoodleTree_86

NoodleTree_96
(methyltransferase)

NoodleTree_97

NoodleTree_98
(portal protein)

NoodleTree_99

NoodleTree_100

NoodleTree_101
(ThyX-like thymidylate synthase)

NoodleTree_102

NoodleTree_103
(RNA ligase)

NoodleTree_104
(LysM domain protein)

NoodleTree_105

NoodleTree_106

NoodleTree_107
(major capsid protein)

NoodleTree_108

NoodleTree_109

NoodleTree_110

NoodleTree_111

NoodleTree_112

NoodleTree_113

NoodleTree_114

NoodleTree_115

NoodleTree_116

NoodleTree_117

NoodleTree_118

NoodleTree_119

NoodleTree_120

NoodleTree_121

NoodleTree_122

NoodleTree_123

NoodleTree_124

NoodleTree_125

NoodleTree_126

NoodleTree_127

NoodleTree_128
(N-acetyltransferase)

NoodleTree_129

NoodleTree_130

NoodleTree_131

NoodleTree_132

NoodleTree_133

NoodleTree_134
(tail sheath protein)

NoodleTree_135

NoodleTree_136
(major tail protein)

NoodleTree_137
(tail assembly chaperone)

NoodleTree_138
(tail assembly chaperone)

NoodleTree_139
(tape measure protein)

NoodleTree_140
(minor tail protein)

NoodleTree_141

NoodleTree_142

NoodleTree_143
(minor tail protein)

NoodleTree_144

NoodleTree_145

NoodleTree_146
(baseplate wedge protein)

NoodleTree_147
(baseplate wedge protein)

NoodleTree_148

NoodleTree_149

NoodleTree_150

NoodleTree_151
(minor tail protein)

NoodleTree_152
(minor tail protein)

NoodleTree_153

NoodleTree_154

NoodleTree_155

NoodleTree_156

NoodleTree_157

NoodleTree_158

NoodleTree_159

NoodleTree_163

NoodleTree_164
(peptidyl tRNA hydrolase)

NoodleTree_178

NoodleTree_179
(D-ala-D-ala carboxypeptidase)

NoodleTree_180

NoodleTree_192

NoodleTree_193

NoodleTree_194
(helicase)

NoodleTree_195

NoodleTree_196

NoodleTree_197

NoodleTree_198

NoodleTree_199

NoodleTree_200

NoodleTree_201

NoodleTree_202

NoodleTree_203

NoodleTree_204
(thymidylate kinase)

NoodleTree_205
(aminotransferase)

NoodleTree_206
(RNA binding domain protein)

NoodleTree_207

NoodleTree_208
(DnaC-like helicase loader)

NoodleTree_209
(DnaB-like dsDNA helicase)

NoodleTree_210

NoodleTree_211
(DNA primase)

NoodleTree_212

NoodleTree_213
(DnaJ-like chaperonin)

NoodleTree_214
(ssDNA binding domain protein)

NoodleTree_215
(DNA polymerase III (alpha))

NoodleTree_216
(RF-1 peptide chain release factor)

NoodleTree_217
(RecA-like DNA recombinase)

NoodleTree_218
(holliday junction resolvase)

NoodleTree_219

NoodleTree_220
(HNH endonuclease)

NoodleTree_221
(RusA-like resolvase)

NoodleTree_222

NoodleTree_223

NoodleTree_224

NoodleTree_225

NoodleTree_226
(glycoside hydrolase)

NoodleTree_227

NoodleTree_228

NoodleTree_231

NoodleTree_232

NoodleTree_233

NoodleTree_234

NoodleTree_235

NoodleTree_236

NoodleTree_237

NoodleTree_238

NoodleTree_239
(galactosyltransferase)

NoodleTree_240
(nicotinate ribosyltransferase)

NoodleTree_241
(glycosyltransferase)

NoodleTree_242

NoodleTree_243

NoodleTree_244

NoodleTree_245

NoodleTree_246
(lysin A)

NoodleTree_247
(membrane protein)

NoodleTree_248
(lysin B)

NoodleTree_249
(terminase)

NoodleTree_250

NoodleTree_251

NoodleTree_252

NoodleTree_253

NoodleTree_254
(polynucleotide kinase)

NoodleTree_255

NoodleTree_256

NoodleTree_257
(serine/threonine kinase)

NoodleTree_258

NoodleTree_259

NoodleTree_260
(adenylosuccinate synthetase)

NoodleTree_261

NoodleTree_262

NoodleTree_263

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359346
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 32
Pitt Freezer Box Grid# G3
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload