Mycobacterium phage Nappy
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Detailed Information for Phage Nappy
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAnand Naranbhai
Year Found2008
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates29.8587 S, 31.0218 E Map
Discovery Notessoil sample from home garden
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 20, 2011
Sequencing FacilityPittsburgh Bacteriophage Institute
Genome length (bp)156646
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Derek (C1)

Dietrick (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HyRo (C1)

I3 (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

Jemmno (C1)

Jessibeth14 (C1)

JPickles (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

Mangeria (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

StephanieG (C1)

Stubby (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque Notes0.3 mm turbid plaques.
MorphotypeMyoviridae
Number of Genes233
Number of tRNAs33
Has been Phamerated?Yes
Gene List

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Nappy_1

Nappy_2

Nappy_3
(nucleotidyltransferase)

Nappy_4

Nappy_5

Nappy_6

Nappy_7

Nappy_8

Nappy_9

Nappy_10

Nappy_11

Nappy_12

Nappy_13

Nappy_14

Nappy_15

Nappy_16

Nappy_17

Nappy_18

Nappy_19

Nappy_20
(histidine triad nucleotide binding protein)

Nappy_21

Nappy_22

Nappy_23

Nappy_24

Nappy_25

Nappy_26

Nappy_27

Nappy_28

Nappy_29

Nappy_30
(band-7-like membrane protein)

Nappy_31

Nappy_32

Nappy_33

Nappy_34

Nappy_35

Nappy_36

Nappy_37

Nappy_38

Nappy_39

Nappy_40

Nappy_41

Nappy_42

Nappy_43

Nappy_44

Nappy_45

Nappy_46

Nappy_47

Nappy_48

Nappy_49

Nappy_50

Nappy_51

Nappy_52

Nappy_53

Nappy_54

Nappy_55

Nappy_56

Nappy_57

Nappy_58

Nappy_59

Nappy_60

Nappy_61

Nappy_62

Nappy_63

Nappy_64

Nappy_65
(helix-turn-helix DNA binding protein)

Nappy_66

Nappy_67

Nappy_68

Nappy_69

Nappy_70

Nappy_71

Nappy_72

Nappy_73

Nappy_74

Nappy_75

Nappy_76

Nappy_77

Nappy_78

Nappy_79

Nappy_80

Nappy_81

Nappy_82

Nappy_83

Nappy_84

Nappy_89

Nappy_90
(HNH endonuclease)

Nappy_91

Nappy_92
(portal protein)

Nappy_93

Nappy_94

Nappy_95
(ThyX-like thymidylate synthase)

Nappy_96

Nappy_97

Nappy_98
(HNH endonuclease)

Nappy_99

Nappy_100

Nappy_101

Nappy_102
(major capsid protein)

Nappy_103

Nappy_104

Nappy_105

Nappy_106

Nappy_107

Nappy_108

Nappy_109

Nappy_110

Nappy_111

Nappy_112

Nappy_113

Nappy_114

Nappy_115

Nappy_116

Nappy_117

Nappy_118

Nappy_119

Nappy_120

Nappy_121

Nappy_122

Nappy_123

Nappy_124

Nappy_125

Nappy_126

Nappy_127

Nappy_128

Nappy_129

Nappy_130

Nappy_131

Nappy_133
(tail assembly chaperone)

Nappy_132
(tail assembly chaperone)

Nappy_134
(tape measure protein)

Nappy_135

Nappy_136

Nappy_137

Nappy_138
(minor tail protein)

Nappy_139

Nappy_140

Nappy_141

Nappy_142
(baseplate J protein)

Nappy_143

Nappy_144

Nappy_145

Nappy_146

Nappy_147
(minor tail protein)

Nappy_148

Nappy_149

Nappy_150

Nappy_151

Nappy_152

Nappy_153

Nappy_154

Nappy_156
(HNH endonuclease)

Nappy_159
(peptidyl tRNA hydrolase)

Nappy_174
(minor tail protein)

Nappy_175

Nappy_186

Nappy_187

Nappy_188
(DNA helicase)

Nappy_189

Nappy_190

Nappy_191

Nappy_192

Nappy_193

Nappy_194

Nappy_195

Nappy_196

Nappy_197

Nappy_198

Nappy_199
(aminotransferase)

Nappy_200

Nappy_201

Nappy_202

Nappy_203
(DnaC-like helicase loader)

Nappy_204
(DnaB-like dsDNA helicase)

Nappy_205

Nappy_206
(DNA primase)

Nappy_207

Nappy_208
(DnaJ-like chaperonin)

Nappy_209

Nappy_210
(DnaE-like DNA polymerase III)

Nappy_211
(RF-1 peptide chain release factor)

Nappy_212
(RecA-like DNA recombinase)

Nappy_213

Nappy_214

Nappy_215

Nappy_216
(RusA-like resolvase)

Nappy_217

Nappy_218

Nappy_219

Nappy_220

Nappy_221

Nappy_222

Nappy_223
(HNH endonuclease)

Nappy_224

Nappy_227

Nappy_228

Nappy_229

Nappy_230

Nappy_231

Nappy_232

Nappy_233

Nappy_234

Nappy_235

Nappy_236

Nappy_237

Nappy_238

Nappy_239
(glycosyltransferase)

Nappy_240

Nappy_241
(glycosyltransferase)

Nappy_242
(glycosyltransferase)

Nappy_243

Nappy_244
(glycosyltransferase)

Nappy_245

Nappy_246

Nappy_247

Nappy_248

Nappy_249
(lysin A)

Nappy_250
(holin)

Nappy_251
(lysin B)

Nappy_252
(terminase)

Nappy_253

Nappy_254

Nappy_255

Nappy_256

Nappy_257
(polynucleotide kinase)

Nappy_258

Nappy_259

Nappy_260
(serine/threonine kinase)

Nappy_261

Nappy_262

Nappy_263
(PurA-like adenylosuccinate synthetase)

Nappy_264

Nappy_265

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN699627
Refseq NumberNC_023725
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# E3
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload