Mycobacterium phage BadAgartude
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Detailed Information for Phage BadAgartude
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMatthew Frisque and Zachary Zagra
Year Found2013
Location FoundKenosha, WI United States
Finding InstitutionCarthage College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates42.619617 N, 87.821333 W Map
Discovery NotesThe sample was taken from underneath a group of trees by our dormitory. We assume the soil had been fertilized but are uncertain. The sample was collected on 9/6/13 and was a dirt sample. There were decomposing leaves and bark present.
Naming Notes...we had some troubles with the top agar. Frequently.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 26, 2015
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3304
Genome length (bp)155658
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

Linnaeus (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

MoBama (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

SuperCallie (None)

TinyC (None)

Trilla23 (None)

Turret (None)

RetimsGems (A1)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Donegal (C1)

Doodle1 (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

Grungle (C1)

Guwapp (C1)

HarrySpotter (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Jessibeth14 (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Lionheart (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LRRHood (C1)

Lukilu (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

MrsHay (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

OaklaforG (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

SandySandal (C1)

Sauce (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Feauphix (C2)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Annotation StatusIn GenBank
Plaque NotesThis phage is a lytic phage that results in very small, but numerous pfus. The approximate diameter of this phage was 1.55mm.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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BadAgartude_1

BadAgartude_2

BadAgartude_3
(HNH endonuclease)

BadAgartude_4

BadAgartude_5

BadAgartude_6

BadAgartude_7

BadAgartude_8

BadAgartude_9

BadAgartude_10

BadAgartude_11

BadAgartude_12

BadAgartude_13

BadAgartude_14

BadAgartude_15

BadAgartude_16

BadAgartude_17

BadAgartude_18

BadAgartude_19

BadAgartude_20

BadAgartude_21

BadAgartude_22

BadAgartude_23

BadAgartude_24

BadAgartude_25

BadAgartude_26

BadAgartude_27

BadAgartude_28

BadAgartude_29

BadAgartude_30

BadAgartude_31

BadAgartude_32
(helix-turn-helix DNA binding protein)

BadAgartude_33

BadAgartude_34

BadAgartude_35

BadAgartude_36
(ribbon-helix-helix DNA binding domain)

BadAgartude_37

BadAgartude_38

BadAgartude_39

BadAgartude_40

BadAgartude_41

BadAgartude_42

BadAgartude_43

BadAgartude_44

BadAgartude_45

BadAgartude_46

BadAgartude_47

BadAgartude_48

BadAgartude_49

BadAgartude_50

BadAgartude_51

BadAgartude_52

BadAgartude_53

BadAgartude_54

BadAgartude_55
(helix-turn-helix DNA binding domain)

BadAgartude_56

BadAgartude_57

BadAgartude_58

BadAgartude_59

BadAgartude_60

BadAgartude_61

BadAgartude_62
(helix-turn-helix DNA binding domain)

BadAgartude_63
(helix-turn-helix DNA binding domain)

BadAgartude_64

BadAgartude_65

BadAgartude_66

BadAgartude_67

BadAgartude_68

BadAgartude_69

BadAgartude_70

BadAgartude_71

BadAgartude_72

BadAgartude_73

BadAgartude_74

BadAgartude_75

BadAgartude_76

BadAgartude_77

BadAgartude_78

BadAgartude_79

BadAgartude_80

BadAgartude_85
(methyltransferase)

BadAgartude_86

BadAgartude_87
(portal protein)

BadAgartude_88

BadAgartude_89

BadAgartude_90
(ThyX-like thymidylate synthase)

BadAgartude_91

BadAgartude_92
(RNA ligase)

BadAgartude_93
(LysM-domain)

BadAgartude_94

BadAgartude_95

BadAgartude_96
(major capsid protein)

BadAgartude_97
(capsid decoration protein)

BadAgartude_98

BadAgartude_99

BadAgartude_100

BadAgartude_101

BadAgartude_102

BadAgartude_103

BadAgartude_104
(membrane protein)

BadAgartude_105

BadAgartude_106

BadAgartude_107

BadAgartude_108

BadAgartude_109

BadAgartude_110

BadAgartude_111

BadAgartude_112

BadAgartude_113

BadAgartude_114

BadAgartude_115

BadAgartude_116

BadAgartude_117
(N-acetyltransferase)

BadAgartude_118

BadAgartude_119

BadAgartude_120

BadAgartude_121

BadAgartude_122

BadAgartude_123
(tail sheath protein)

BadAgartude_124

BadAgartude_125

BadAgartude_126
(tail assembly chaperone)

BadAgartude_127
(tail assembly chaperone)

BadAgartude_128
(tape measure protein)

BadAgartude_129
(minor tail protein)

BadAgartude_130

BadAgartude_131

BadAgartude_132
(minor tail protein)

BadAgartude_133

BadAgartude_134

BadAgartude_135
(baseplate wedge protein)

BadAgartude_136
(baseplate wedge protein)

BadAgartude_137

BadAgartude_138

BadAgartude_139

BadAgartude_140
(minor tail protein)

BadAgartude_141
(minor tail protein)

BadAgartude_142

BadAgartude_143

BadAgartude_144

BadAgartude_145

BadAgartude_146

BadAgartude_147

BadAgartude_148

BadAgartude_152

BadAgartude_153
(peptidyl tRNA hydrolase)

BadAgartude_168
(minor tail protein, D-ala-D-ala carboxypeptidase)

BadAgartude_169

BadAgartude_181

BadAgartude_182
(helicase)

BadAgartude_183

BadAgartude_184

BadAgartude_185

BadAgartude_186

BadAgartude_187
(membrane protein)

BadAgartude_188

BadAgartude_189

BadAgartude_190

BadAgartude_191
(thymidylate kinase)

BadAgartude_192
(aminotransferase)

BadAgartude_193
(RNA binding domain)

BadAgartude_194

BadAgartude_195

BadAgartude_196
(DnaC-like helicase loader)

BadAgartude_197
(DnaB-like dsDNA helicase)

BadAgartude_198

BadAgartude_199
(DNA primase)

BadAgartude_200

BadAgartude_201
(chaperonin DnaJ-like)

BadAgartude_202
(ssDNA binding domain)

BadAgartude_203
(DNA polymerase III (alpha))

BadAgartude_204
(RF-1 peptide chain release factor)

BadAgartude_205
(RecA-like DNA recombinase)

BadAgartude_206
(Holliday junction revolvase)

BadAgartude_207

BadAgartude_208
(HNH endonuclease)

BadAgartude_209
(RusA-like resolvase)

BadAgartude_210

BadAgartude_211

BadAgartude_212

BadAgartude_213

BadAgartude_214
(glycoside hydrolase)

BadAgartude_215

BadAgartude_216

BadAgartude_219

BadAgartude_220

BadAgartude_221

BadAgartude_222

BadAgartude_223

BadAgartude_224

BadAgartude_225

BadAgartude_226

BadAgartude_227
(Ro-like RNA binding protein)

BadAgartude_228

BadAgartude_229

BadAgartude_230

BadAgartude_231

BadAgartude_232

BadAgartude_233

BadAgartude_234
(galactosaminyltransferase)

BadAgartude_235

BadAgartude_236
(glycosyltransferase)

BadAgartude_237
(galactosyltransferase)

BadAgartude_238
(nicotinate ribosyltransferase)

BadAgartude_239
(glycosyltransferase)

BadAgartude_240

BadAgartude_241

BadAgartude_242

BadAgartude_243

BadAgartude_244
(lysin A)

BadAgartude_245
(membrane protein)

BadAgartude_246
(lysin B)

BadAgartude_247
(terminase)

BadAgartude_248

BadAgartude_249

BadAgartude_250

BadAgartude_251

BadAgartude_252
(polynucleotide kinase)

BadAgartude_253

BadAgartude_254

BadAgartude_255
(serine/threonine kinase)

BadAgartude_256

BadAgartude_257

BadAgartude_258
(adenylosuccinate synthetase)

BadAgartude_259

BadAgartude_260

BadAgartude_261

BadAgartude_262

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359353
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.5x10^11
Pitt Freezer Box# 4
Pitt Freezer Box Grid# G7
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload