Detailed Information for Phage Asterius |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Tobias Shaw |
Year Found | 2023 |
Location Found | Columbus, OH United States |
Finding Institution | Hope College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 34°C |
GPS Coordinates | 40.1 N, 83.0 W Map |
Discovery Notes | Collected from soil underneath tomato plant roots in my backyard. |
Naming Notes | Asterius is the Minotaur of the Labyrinth in Greek mythology. He's quite an interesting character, and I thought that he should be represented in the phage database. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 2, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 525 |
Genome length (bp) | 154871 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Hope College |
Annotation Status | Awaiting_QC |
Plaque Notes | After 48 hours at 34 degrees Celcius, Asterius plaques show two distinct morphologies: one larger comet tail plaque type with a clear center and then increasingly turbid ring/tail, and a smaller pinprick plaque type with a clear center and turbid ring. The larger plaques have a diameter of about 1.5mm, and the smaller pinpricks have a diameter of about 0.3-0.5mm. |
Morphotype | Myoviridae |
Number of Genes | 230 |
Number of tRNAs | 33 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
182 |
Pitt Freezer Box Grid# |
F2 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |