| Detailed Information for Phage Babyland |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Therese Joffre |
| Year Found | 2020 |
| Location Found | Holland, MI United States |
| Finding Institution | Hope College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 42.7868 N, 86.1019 W Map |
| Discovery Notes | The soil sample was found on a slight hill on Hope College's campus. The soil was dug about 3 inches below the surface under mulch. The soil was dark brown and damp. There was a lot of organic matter within the sample and a living worm when collected. |
| Naming Notes | My family would always say babyland as a fictional place within our home. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 13, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 143 |
| Genome length (bp) | 155330 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Lagos |
| Annotation Status | In GenBank |
| Plaque Notes | Very small, clear plaques. In serial dilutions when determining the titer value, plaques were quite small and was hard to determine where they were without a backlight. |
| Morphotype | Myoviridae |
| Number of Genes | 235 |
| Number of tRNAs | 32 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OQ709204 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
117 |
| Pitt Freezer Box Grid# |
B6 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
