| Detailed Information for Phage BadAgartude |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Matthew Frisque and Zachary Zagra |
| Year Found | 2013 |
| Location Found | Kenosha, WI USA |
| Finding Institution | Carthage College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 42.619617 N, 87.821333 W Map |
| Discovery Notes | The sample was taken from underneath a group of trees by our dormitory. We assume the soil had been fertilized but are uncertain. The sample was collected on 9/6/13 and was a dirt sample. There were decomposing leaves and bark present. |
| Naming Notes | ...we had some troubles with the top agar. Frequently. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 26, 2015 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 3304 |
| Genome length (bp) | 155658 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | This phage is a lytic phage that results in very small, but numerous pfus. The approximate diameter of this phage was 1.55mm. |
| Morphotype | Myoviridae |
| Number of Genes | 227 |
| Number of tRNAs | 33 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK359353 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
1.5x10^11 |
| Pitt Freezer Box# |
4 |
| Pitt Freezer Box Grid# |
G7 |
| Available Files |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |