| Detailed Information for Phage Capablanca |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Former names | PhiRho |
| Found By | Rebecca Mold |
| Year Found | 2021 |
| Location Found | West Lafayette, IN USA |
| Finding Institution | Purdue University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 18°C |
| GPS Coordinates | 40.435312 N, 86.925449 W Map |
| Discovery Notes | This sample was taken from the flowerbed in front of the Phi Sigma Rho Alpha Chapter sorority house on Purdue's campus. The soil sample was dry and slightly cold to the touch. The soil contained many larger pieces of mulch in addition to finer soil below. The sample was collected approximately 0.5 inch below the surface of the ground. The approximate temperature when the sample was taken was 64 degrees Fahrenheit.
Contributing students in lab: Logan Hamilton and Joseph Hickam and Alicia Zeh. |
| Naming Notes | Originally named after where it was found, in front of the house for Phi Sigma Rho Sorority Alpha Chapter on the campus of Purdue University. Then renamed after chess champion Raul Capablanca whose last name also evokes a lab coat. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 10, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 182 |
| Genome length (bp) | 157537 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Purdue University |
| Annotation Status | In GenBank |
| Morphotype | Myoviridae |
| Number of Genes | 238 |
| Number of tRNAs | 33 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OP021681 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
138 |
| Pitt Freezer Box Grid# |
C6 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
