Mycobacterium phage Concombre
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Detailed Information for Phage Concombre
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByYu-Jen Wang
Year Found2022
Location FoundTainan, Taiwan
Finding InstitutionAcademia Sinica
ProgramUnavailable
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates23.031794 N, 120.304008 E Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 25, 2022
Sequencing FacilityBiodiversity Research Center at Academia Sinica, Taiwan
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage312
Genome length (bp)156656
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

Lethe (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionAcademia Sinica
Annotation StatusBeing Annotated (Expected completion by 1/1/2026)
Plaque NotesThe diameter of the plaques is around 1 mm. The shape is circular with irregular edges. The plaques are clear. The phage concentration in the sample is high. Many plaques were observed on the plate after overnight culture.
MorphotypeMyoviridae
Number of Genes239
Number of tRNAs34
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Concombre_1

Concombre_2

Concombre_3

Concombre_4

Concombre_5

Concombre_6

Concombre_7

Concombre_8

Concombre_9

Concombre_10

Concombre_11

Concombre_12

Concombre_13

Concombre_14

Concombre_15

Concombre_16

Concombre_17

Concombre_18

Concombre_19

Concombre_20

Concombre_21

Concombre_22

Concombre_23

Concombre_24

Concombre_25

Concombre_26

Concombre_27

Concombre_28

Concombre_29

Concombre_30

Concombre_31

Concombre_32

Concombre_33

Concombre_34

Concombre_35

Concombre_36

Concombre_37

Concombre_38

Concombre_39

Concombre_40

Concombre_41

Concombre_42

Concombre_43

Concombre_44

Concombre_45

Concombre_46

Concombre_47

Concombre_48

Concombre_49

Concombre_50

Concombre_51

Concombre_52

Concombre_53

Concombre_54

Concombre_55

Concombre_56

Concombre_57

Concombre_58

Concombre_59

Concombre_60

Concombre_61

Concombre_62

Concombre_63

Concombre_64

Concombre_65

Concombre_66

Concombre_67

Concombre_68

Concombre_69

Concombre_70

Concombre_71

Concombre_72

Concombre_73

Concombre_74

Concombre_75

Concombre_76

Concombre_77

Concombre_78

Concombre_79

Concombre_80

Concombre_81

Concombre_82

Concombre_83

Concombre_84

Concombre_85

Concombre_86

Concombre_87

Concombre_88

Concombre_89

Concombre_90

Concombre_91 — tRNA
(gp91)

Concombre_92 — tRNA
(gp92)

Concombre_93 — tRNA
(gp93)

Concombre_94 — tRNA
(gp94)

Concombre_95

Concombre_96

Concombre_97

Concombre_98

Concombre_99

Concombre_100

Concombre_101

Concombre_102

Concombre_103

Concombre_104

Concombre_105

Concombre_106

Concombre_107

Concombre_108

Concombre_109

Concombre_110

Concombre_111

Concombre_112

Concombre_113

Concombre_114

Concombre_115

Concombre_116

Concombre_117

Concombre_118

Concombre_119

Concombre_120

Concombre_121

Concombre_122

Concombre_123

Concombre_124

Concombre_125

Concombre_126

Concombre_127

Concombre_128

Concombre_129

Concombre_130

Concombre_131

Concombre_132

Concombre_133 — tRNA
(gp133)

Concombre_134

Concombre_135

Concombre_136

Concombre_137

Concombre_138

Concombre_139

Concombre_140

Concombre_141

Concombre_142

Concombre_143

Concombre_144

Concombre_145

Concombre_146

Concombre_147

Concombre_148

Concombre_149

Concombre_150

Concombre_151

Concombre_152

Concombre_153

Concombre_154

Concombre_155

Concombre_156

Concombre_157

Concombre_158

Concombre_159 — tRNA
(gp159)

Concombre_160 — tRNA
(gp160)

Concombre_161 — tRNA
(gp161)

Concombre_162

Concombre_163

Concombre_164 — tRNA
(gp164)

Concombre_165 — tRNA
(gp165)

Concombre_166 — tRNA
(gp166)

Concombre_167 — tRNA
(gp167)

Concombre_168 — tRNA
(gp168)

Concombre_169 — tRNA
(gp169)

Concombre_170

Concombre_171 — tRNA
(gp171)

Concombre_172 — tRNA
(gp172)

Concombre_173 — tRNA
(gp173)

Concombre_174 — tRNA
(gp174)

Concombre_175 — tRNA
(gp175)

Concombre_176 — tRNA
(gp176)

Concombre_177 — tRNA
(gp177)

Concombre_178 — tRNA
(gp178)

Concombre_179

Concombre_180

Concombre_181 — tRNA
(gp181)

Concombre_182 — tRNA
(gp182)

Concombre_183 — tRNA
(gp183)

Concombre_184 — tRNA
(gp184)

Concombre_185 — tRNA
(gp185)

Concombre_186 — tRNA
(gp186)

Concombre_187 — tRNA
(gp187)

Concombre_188 — tRNA
(gp188)

Concombre_189 — tRNA
(gp189)

Concombre_190 — tRNA
(gp190)

Concombre_191

Concombre_192

Concombre_193

Concombre_194

Concombre_195

Concombre_196

Concombre_197

Concombre_198

Concombre_199

Concombre_200

Concombre_201

Concombre_202

Concombre_203

Concombre_204

Concombre_205

Concombre_206

Concombre_207

Concombre_208

Concombre_209

Concombre_210

Concombre_211

Concombre_212

Concombre_213

Concombre_214

Concombre_215

Concombre_216

Concombre_217

Concombre_218

Concombre_219

Concombre_220

Concombre_221

Concombre_222

Concombre_223

Concombre_224

Concombre_225

Concombre_226

Concombre_227

Concombre_228 — tRNA
(gp228)

Concombre_229 — tRNA
(gp229)

Concombre_230

Concombre_231

Concombre_232

Concombre_233

Concombre_234

Concombre_235

Concombre_236

Concombre_237

Concombre_238

Concombre_239

Concombre_240

Concombre_241

Concombre_242

Concombre_243

Concombre_244

Concombre_245

Concombre_246

Concombre_247

Concombre_248

Concombre_249

Concombre_250

Concombre_251

Concombre_252

Concombre_253

Concombre_254

Concombre_255

Concombre_256

Concombre_257

Concombre_258

Concombre_259

Concombre_260

Concombre_261

Concombre_262

Concombre_263

Concombre_264

Concombre_265

Concombre_266

Concombre_267

Concombre_268

Concombre_269

Concombre_270

Concombre_271

Concombre_272

Concombre_273

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload