| Detailed Information for Phage Domi |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Elizabeth Yen, Kissaou Tchedre |
| Year Found | 2024 |
| Location Found | Kyle, TX United States |
| Finding Institution | Austin Community College Highland Campus |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 29.98429 N, 97.75838 W Map |
| Discovery Notes | The sample is from my colleague's garden on the front porch in Kyle, Texas. |
| Naming Notes | When I saw the photos for the first time, the phages looked like a droplet to me and so I decided to translate the word 'droplet' into Latin. So 'droplet' means 'domi' in Latin. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 16, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 2769 |
| Genome length (bp) | 156160 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Austin Community College Highland Campus |
| Annotation Status | Overdue (Expected completion by 1/16/2025) |
| Plaque Notes | Transparent, slightly cloudy, round, ~1 inch in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 228 |
| Number of tRNAs | 32 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
188 |
| Pitt Freezer Box Grid# |
G12 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
