Mycobacterium phage Gamgam
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Detailed Information for Phage Gamgam
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByGabrielle Walker and Amerie Jackson
Year Found2022
Location FoundWashington, DC United States
Finding InstitutionHoward University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates38.92166 N, 77.0208 W Map
Discovery Notes38.9216666N
77.0208333W
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 28, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage412
Genome length (bp)154543
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

Lethe (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionHoward University
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes233
Number of tRNAs32
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Gamgam_1

Gamgam_2

Gamgam_3
(nucleotidyl transferase)

Gamgam_4

Gamgam_5

Gamgam_6

Gamgam_7

Gamgam_8

Gamgam_9

Gamgam_10

Gamgam_11

Gamgam_12

Gamgam_13

Gamgam_14

Gamgam_15

Gamgam_16

Gamgam_17
(histidine triad nucleotide binding protein)

Gamgam_18

Gamgam_19

Gamgam_20

Gamgam_21

Gamgam_22

Gamgam_23

Gamgam_24

Gamgam_25
(HNH endonuclease)

Gamgam_26

Gamgam_27

Gamgam_28

Gamgam_29
(band-7-like membrane protein)

Gamgam_30

Gamgam_31

Gamgam_32

Gamgam_33

Gamgam_34

Gamgam_35
(ribbon-helix-helix DNA binding domain protein)

Gamgam_36

Gamgam_37

Gamgam_38

Gamgam_39

Gamgam_40

Gamgam_41

Gamgam_42

Gamgam_43

Gamgam_44

Gamgam_45

Gamgam_46

Gamgam_47

Gamgam_48

Gamgam_49

Gamgam_50

Gamgam_51

Gamgam_52

Gamgam_53

Gamgam_54

Gamgam_55

Gamgam_56

Gamgam_57

Gamgam_58

Gamgam_59

Gamgam_60

Gamgam_61

Gamgam_62
(helix-turn-helix DNA binding domain protein)

Gamgam_63
(helix-turn-helix DNA binding domain protein)

Gamgam_64

Gamgam_65

Gamgam_66

Gamgam_67

Gamgam_68

Gamgam_69

Gamgam_70

Gamgam_71

Gamgam_72

Gamgam_73

Gamgam_74

Gamgam_75

Gamgam_76

Gamgam_77

Gamgam_78

Gamgam_79

Gamgam_80

Gamgam_81

Gamgam_82

Gamgam_83
(ParB-like nuclease domain protein)

Gamgam_84 — tRNA
(tRNA-Ser(gct))

Gamgam_85 — tRNA
(tRNA-Leu(cag))

Gamgam_86 — tRNA
(tRNA-Leu(gag))

Gamgam_87 — tRNA
(tRNA-Leu(caa))

Gamgam_88

Gamgam_89

Gamgam_90
(portal protein)

Gamgam_91

Gamgam_92

Gamgam_93
(ThyX-like thymidylate synthase)

Gamgam_94

Gamgam_95
(RNA ligase)

Gamgam_96
(HNH endonuclease)

Gamgam_97

Gamgam_98

Gamgam_99

Gamgam_100
(major capsid protein)

Gamgam_101

Gamgam_102
(head fiber protein)

Gamgam_103

Gamgam_104

Gamgam_105

Gamgam_106

Gamgam_107

Gamgam_108

Gamgam_109

Gamgam_110

Gamgam_111

Gamgam_112

Gamgam_113

Gamgam_114

Gamgam_115

Gamgam_116

Gamgam_117

Gamgam_118

Gamgam_119

Gamgam_120

Gamgam_121
(acetyltransferase)

Gamgam_122

Gamgam_123

Gamgam_124

Gamgam_125
(ParB-like nuclease domain protein)

Gamgam_126

Gamgam_127

Gamgam_128
(tail sheath protein)

Gamgam_129

Gamgam_130

Gamgam_131
(tail assembly chaperone)

Gamgam_132
(tail assembly chaperone)

Gamgam_133
(tape measure protein)

Gamgam_134
(minor tail protein)

Gamgam_135

Gamgam_136

Gamgam_137
(minor tail protein)

Gamgam_138

Gamgam_139

Gamgam_140
(baseplate wedge protein)

Gamgam_141
(baseplate J protein)

Gamgam_142

Gamgam_143

Gamgam_144

Gamgam_145
(minor tail protein)

Gamgam_146
(minor tail protein)

Gamgam_147

Gamgam_148

Gamgam_149

Gamgam_150

Gamgam_151

Gamgam_152

Gamgam_153

Gamgam_154 — tRNA
(tRNA-Pro(tgg))

Gamgam_155 — tRNA
(tRNA-Trp(cca))

Gamgam_156 — tRNA
(tRNA-Tyr(gta))

Gamgam_157

Gamgam_158
(peptidyl tRNA hydrolase)

Gamgam_159 — tRNA
(tRNA-Pyl(cta))

Gamgam_160 — tRNA
(fMet; tRNA-fMet(cat))

Gamgam_161 — tRNA
(tRNA-Cys(gca))

Gamgam_162 — tRNA
(tRNA-Glu(ctc))

Gamgam_163 — tRNA
(tRNA-His(gtg))

Gamgam_164 — tRNA
(tRNA-Ala(tgc))

Gamgam_166 — tRNA
(tRNA-Phe(gaa))

Gamgam_167 — tRNA
(tRNA-Val(cac))

Gamgam_168 — tRNA
(tRNA-Lys(ctt))

Gamgam_169 — tRNA
(tRNA-Glu(ttc))

Gamgam_170 — tRNA
(tRNA-Gly(tcc))

Gamgam_171 — tRNA
(tRNA-Thr(cgt))

Gamgam_172 — tRNA
(tRNA-Thr(tgt))

Gamgam_173
(HNH endonuclease)

Gamgam_174 — tRNA
(tRNA-Thr(ggt))

Gamgam_175
(minor tail protein)

Gamgam_176

Gamgam_177 — tRNA
(tRNA-Gly(gcc))

Gamgam_178 — tRNA
(tRNA-Asp(gtc))

Gamgam_179 — tRNA
(tRNA-Ile2(cat))

Gamgam_180 — tRNA
(tRNA-Ile(gat))

Gamgam_181 — tRNA
(tRNA-Arg(acg))

Gamgam_182 — tRNA
(tRNA-Val(gac))

Gamgam_183 — tRNA
(tRNA-Arg(cct))

Gamgam_184 — tmRNA
(Tag peptide: ATDTDATVTDAEIEAFFAEEAAALV*)

Gamgam_185 — tRNA
(tRNA-Gln(ttg))

Gamgam_186 — tRNA
(tRNA-Arg(tct))

Gamgam_187

Gamgam_188
(DNA helicase)

Gamgam_189

Gamgam_190

Gamgam_191

Gamgam_192

Gamgam_193

Gamgam_194

Gamgam_195

Gamgam_196

Gamgam_197

Gamgam_198
(thymidylate kinase)

Gamgam_199
(aminotransferase)

Gamgam_200

Gamgam_201

Gamgam_202

Gamgam_203
(DnaC-like helicase loader)

Gamgam_204
(DnaB-like dsDNA helicase)

Gamgam_205

Gamgam_206
(DNA primase)

Gamgam_207

Gamgam_208
(DnaJ-like chaperonin)

Gamgam_209
(SSB protein)

Gamgam_210
(DnaE-like DNA polymerase III alpha)

Gamgam_211
(RF-1 peptide chain release factor)

Gamgam_212
(RecA-like DNA recombinase)

Gamgam_213
(Holliday junction resolvase)

Gamgam_214

Gamgam_215
(HNH endonuclease)

Gamgam_216
(RusA-like resolvase)

Gamgam_217

Gamgam_218

Gamgam_219

Gamgam_220

Gamgam_221

Gamgam_222

Gamgam_223

Gamgam_224 — tRNA
(tRNA-Gln(ctg))

Gamgam_225 — tRNA
(tRNA-Asn(gtt))

Gamgam_226

Gamgam_227

Gamgam_228

Gamgam_229

Gamgam_230

Gamgam_231

Gamgam_232

Gamgam_233

Gamgam_234
(Ro-like RNA binding protein)

Gamgam_235

Gamgam_236

Gamgam_237

Gamgam_238

Gamgam_239

Gamgam_240

Gamgam_241

Gamgam_242
(glycosyltransferase)

Gamgam_243

Gamgam_244
(glycosyltransferase)

Gamgam_245
(glycosyltransferase)

Gamgam_246
(PnuC-like nicotinamide riboside transporter)

Gamgam_247
(glycosyltransferase)

Gamgam_248

Gamgam_249

Gamgam_250

Gamgam_251

Gamgam_252
(lysin A)

Gamgam_253
(holin)

Gamgam_254
(lysin B)

Gamgam_255
(terminase)

Gamgam_256

Gamgam_257

Gamgam_258

Gamgam_259

Gamgam_260
(polynucleotide kinase)

Gamgam_261

Gamgam_262
(serine/threonine kinase)

Gamgam_263

Gamgam_264

Gamgam_265
(PurA-like adenylosuccinate synthetase)

Gamgam_266

Gamgam_267

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR475248
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 6.7 X 10^9 pfu/ml
Pitt Freezer Box# 150
Pitt Freezer Box Grid# B2