Mycobacterium phage Issimir
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Detailed Information for Phage Issimir
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByIsrael Bellinger (adopted from Destiny Thompson)
Year Found2023
Location FoundRock Hill, SC United States
Finding InstitutionWinthrop University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates34.940074 N, 81.033099 W Map
Naming NotesI named it after combining my nickname (Issie) with my middle name (Amir).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 27, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage991
Genome length (bp)155564
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionWinthrop University
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes228
Number of tRNAs32
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Issimir_1

Issimir_2

Issimir_3
(nucleotidyl transferase)

Issimir_4

Issimir_5

Issimir_6

Issimir_7

Issimir_8

Issimir_9

Issimir_10

Issimir_11

Issimir_12

Issimir_13

Issimir_14

Issimir_15

Issimir_16

Issimir_17

Issimir_18
(histidine triad nucleotide binding protein)

Issimir_19

Issimir_20

Issimir_21

Issimir_22

Issimir_23

Issimir_24

Issimir_25

Issimir_26

Issimir_27

Issimir_28

Issimir_29
(membrane protein, Band-7 like)

Issimir_30

Issimir_31

Issimir_32

Issimir_33

Issimir_34

Issimir_35
(ribbon-helix-helix DNA binding domain)

Issimir_36

Issimir_37

Issimir_38

Issimir_39

Issimir_40

Issimir_41

Issimir_42

Issimir_43

Issimir_44

Issimir_45

Issimir_46

Issimir_47

Issimir_48

Issimir_49

Issimir_50

Issimir_51

Issimir_52

Issimir_53

Issimir_54

Issimir_55

Issimir_56
(helix-turn-helix DNA binding domain)

Issimir_57

Issimir_58

Issimir_59

Issimir_60

Issimir_61

Issimir_62

Issimir_63
(helix-turn-helix DNA binding domain)

Issimir_64
(helix-turn-helix DNA binding domain)

Issimir_65

Issimir_66

Issimir_67

Issimir_68

Issimir_69

Issimir_70

Issimir_71

Issimir_72

Issimir_73

Issimir_74

Issimir_75

Issimir_76

Issimir_77

Issimir_78

Issimir_79

Issimir_80

Issimir_81

Issimir_82
(ParB-like nuclease domain)

Issimir_83 — tRNA
(tRNA-Ser(gct))

Issimir_84 — tRNA
(tRNA-Leu(cag))

Issimir_85 — tRNA
(tRNA-Leu(gag))

Issimir_86 — tRNA
(tRNA-Leu(caa))

Issimir_87

Issimir_88

Issimir_89
(portal protein)

Issimir_90

Issimir_91

Issimir_92
(ThyX-like thymidylate synthase)

Issimir_93

Issimir_94
(RNA ligase)

Issimir_95
(LysM-like peptidoglycan binding protein)

Issimir_96

Issimir_97

Issimir_98
(major capsid protein)

Issimir_99
(HNH endonuclease)

Issimir_100

Issimir_101
(head fiber protein)

Issimir_102

Issimir_103

Issimir_104

Issimir_105

Issimir_106

Issimir_107

Issimir_108

Issimir_109

Issimir_110

Issimir_111

Issimir_112

Issimir_113

Issimir_114

Issimir_115

Issimir_116

Issimir_117

Issimir_118

Issimir_119
(acetyltransferase)

Issimir_120

Issimir_121

Issimir_122
(ParB-like nuclease domain)

Issimir_123

Issimir_124

Issimir_125
(tail sheath protein)

Issimir_126

Issimir_127

Issimir_128
(tail assembly chaperone)

Issimir_129
(tail assembly chaperone)

Issimir_130
(tape measure protein)

Issimir_131

Issimir_132

Issimir_133

Issimir_134
(minor tail protein)

Issimir_135
(minor tail protein)

Issimir_136
(minor tail protein)

Issimir_137
(baseplate wedge protein)

Issimir_138
(baseplate J protein)

Issimir_139

Issimir_140

Issimir_141

Issimir_142
(minor tail protein)

Issimir_143
(minor tail protein)

Issimir_144

Issimir_145

Issimir_146

Issimir_147

Issimir_148

Issimir_149

Issimir_150

Issimir_151 — tRNA
(tRNA-Pro(tgg))

Issimir_152 — tRNA
(tRNA-Trp(cca))

Issimir_153 — tRNA
(tRNA-Tyr(gta))

Issimir_154

Issimir_155
(peptidyl tRNA hydrolase)

Issimir_156 — tRNA
(tRNA-Pyl(cta))

Issimir_157 — tRNA
(tRNA-Met(cat))

Issimir_158 — tRNA
(tRNA-Cys(gca))

Issimir_159 — tRNA
(tRNA-Glu(ctc))

Issimir_160 — tRNA
(tRNA-His(gtg))

Issimir_161 — tRNA
(tRNA-Ala(tgc))

Issimir_162 — tRNA
(tRNA-Phe(gaa))

Issimir_163 — tRNA
(tRNA-Val(cac))

Issimir_164 — tRNA
(tRNA-Lys(ctt))

Issimir_165 — tRNA
(tRNA-Glu(ttc))

Issimir_166 — tRNA
(tRNA-Gly(tcc))

Issimir_167 — tRNA
(tRNA-Thr(cgt))

Issimir_168 — tRNA
(tRNA-Thr(tgt))

Issimir_169 — tRNA
(tRNA-Thr(ggt))

Issimir_170
(minor tail protein, D-ala-D-ala carboxypeptidase)

Issimir_171

Issimir_172 — tRNA
(tRNA-Gly(gcc))

Issimir_173 — tRNA
(tRNA-Asp(gtc))

Issimir_174 — tRNA
(fMet; tRNA-fMet(cat))

Issimir_175 — tRNA
(tRNA-Ile(gat))

Issimir_176 — tRNA
(tRNA-Arg(acg))

Issimir_177 — tRNA
(tRNA-Val(gac))

Issimir_178 — tRNA
(tRNA-Arg(cct))

Issimir_179 — tRNA
(tRNA-Gln(ttg))

Issimir_180 — tRNA
(tRNA-Arg(tct))

Issimir_181

Issimir_182
(DNA helicase)

Issimir_183

Issimir_184

Issimir_185

Issimir_186

Issimir_187

Issimir_188

Issimir_189

Issimir_190

Issimir_191
(thymidylate kinase)

Issimir_192
(aminotransferase)

Issimir_193

Issimir_194

Issimir_195
(DnaC-like helicase loader)

Issimir_196
(DnaB-like dsDNA helicase)

Issimir_197

Issimir_198
(DNA primase)

Issimir_199

Issimir_200
(chaperonin, DnaJ-like)

Issimir_201
(SSB protein)

Issimir_202
(DnaE-like DNA polymerase III (alpha))

Issimir_203
(RF-1 peptide chain release factor)

Issimir_204
(RecA-like DNA recombinase)

Issimir_205
(Holliday junction resolvase)

Issimir_206

Issimir_207
(HNH endonuclease)

Issimir_208
(RusA-like resolvase)

Issimir_209

Issimir_210

Issimir_211

Issimir_212

Issimir_213

Issimir_214

Issimir_215

Issimir_216 — tRNA
(tRNA-Gln(ctg))

Issimir_217 — tRNA
(tRNA-Asn(gtt))

Issimir_218

Issimir_219

Issimir_220

Issimir_221

Issimir_222

Issimir_223

Issimir_224

Issimir_225

Issimir_226
(Ro-like RNA binding protein)

Issimir_227

Issimir_228

Issimir_229

Issimir_230

Issimir_231

Issimir_232

Issimir_233
(glycoslytransferase)

Issimir_234

Issimir_235
(glycosyltransferase)

Issimir_236
(glycosyltransferase)

Issimir_237
(PnuC-like Nicotinamide riboside transporter)

Issimir_238
(glycosyltransferrase)

Issimir_239

Issimir_240

Issimir_241

Issimir_242

Issimir_243
(HNH endonuclease)

Issimir_244
(lysin A)

Issimir_245
(holin)

Issimir_246
(lysin B)

Issimir_247
(terminase)

Issimir_248

Issimir_249

Issimir_250

Issimir_251

Issimir_252
(polynucleotide kinase)

Issimir_253

Issimir_254

Issimir_255
(serine/theonine kinase)

Issimir_256

Issimir_257

Issimir_258
(adenylosuccinate synthetase PurA-like)

Issimir_259

Issimir_260

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ184821
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.3 x 10^9 pfu/mL
Pitt Freezer Box# 169
Pitt Freezer Box Grid# F12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload