Detailed Information for Phage Issimir |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Israel Bellinger (adopted from Destiny Thompson) |
Year Found | 2023 |
Location Found | Rock Hill, SC United States |
Finding Institution | Winthrop University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 34.940074 N, 81.033099 W Map |
Naming Notes | I named it after combining my nickname (Issie) with my middle name (Amir). |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 27, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 991 |
Genome length (bp) | 155564 |
Character of genome ends | Circularly Permuted |
GC Content | 64.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Winthrop University |
Annotation Status | In GenBank |
Morphotype | Myoviridae |
Number of Genes | 228 |
Number of tRNAs | 32 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ184821 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.3 x 10^9 pfu/mL |
Pitt Freezer Box# |
169 |
Pitt Freezer Box Grid# |
F12 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |